| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2950 |
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| Symbol | |
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| ID | 4080992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 3092431 |
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| End bp | 3093738 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638011335 |
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| Product | diaminobutyrate--2-oxoglutarate aminotransferase |
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| Protein accession | YP_617988 |
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| Protein GI | 103488427 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00709] 2,4-diaminobutyrate 4-transaminases
[TIGR02407] diaminobutyrate--2-oxoglutarate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.860065 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATTA CGACACCGCA ACCGTCCGGC AACCTTCCGG ATCGGAGCAT TTATGAACGC
CGCGAATCGG CGGTGCGCAG CTACGCCCGG TCGATGCCGC GCCAATTCGG TAAAGCGCAG
GGCGTGTGGA TGCACGATGA TCAGGGCGGG CGTTATCTCG ACTTCCTGTC GGGCTGTTCG
ACGCTGAACT ATGGCCACAA CCATCCGATT TTGAAACAGG CGCTGCTCGA CTATATCGCC
GCCGACGGCA TCGCCCACGG GCTCGACCTG CACACCGATG CAAAGCAGGA CTTTCTCGAC
ACGTTCGAGG AAGTGATCCT GAAACCGCGC GGGCTCGACC ACCGCGTGAT GTTCACCGGC
CCGACCGGCA CCAACGCTGT CGAGGCCGCG ATCAAGCTCG CGCGCAAGGT GACGGGCCGC
GAAATGGTGA TCGCCTTTAC CAACGGCTTT CACGGCATGA CGTTGGGCGC GCTCGCCTGC
ACCGGCAATG CGACCAAGCG CGGCGGCGCG GGCGTACCGC TGAGCCACGT CGCGCACGAA
CCCTATTATG ATTATTACGG TCCCGAGGTC GATACCGCCG AATTGCTCGA ACAACGGCTC
GCCGACCCGT CGAGCGGGCT CGACGCGCCC GCGGCGATCC TCGTCGAAAC GGTGCAGGGT
GAGGGCGGGC TCAATGCCGC CTCGGCCGAA TGGCTGCGCC GCATCGCGGG AATCGCGAAG
GCGCATGGCG CGCTGCTGAT CGTCGACGAC ATCCAGGCGG GTTGCGGCCG CACCGGCACC
TTCTTCAGCT TCGAGGATAT GGGCTTCACC CCCGATATCG TGACGCTGGC GAAGTCGCTG
TCGGGCATGG GCCTGCCCTT TGCGCTGACC CTGCTGCGTC CCGAGCTCGA CCAATGGTCG
CCGGGCGAGC ATAACGGCAC CTTCCGCGGC AACAACCATG CCTTTGTCAC CGCGACCGCC
GCGCTCCGCC ATTTCTGGAG CGCCGACGAT TTCCAGCGCG ACATAGGCCG CCGCGCCGCC
CTGCTCGAAA CCCGCCTCGC GCGCATCGCC GCCGAACATG GGTTCGAGGT GCGCGGGCGC
GGCATGATGC GCGGCGTCAA TGTCGGCTCG GGCGAGCTCG CCGCGACCGT CACCGCCGCC
TGCTTCGACG CCGGGCTGAT CATCGAGACC AGCGGCGCGC ACGACGAGGT GATCAAGGTG
CTCGCCCCGC TCGTCATCGA CGATGCGGTG CTCGGTGCCG GCCTCGACAT CCTCGAAAGC
AAGATCCGCG AGGCGATGGC CACCGATTAC GCCGTCGCCG CCGAATAA
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| Protein sequence | MMITTPQPSG NLPDRSIYER RESAVRSYAR SMPRQFGKAQ GVWMHDDQGG RYLDFLSGCS
TLNYGHNHPI LKQALLDYIA ADGIAHGLDL HTDAKQDFLD TFEEVILKPR GLDHRVMFTG
PTGTNAVEAA IKLARKVTGR EMVIAFTNGF HGMTLGALAC TGNATKRGGA GVPLSHVAHE
PYYDYYGPEV DTAELLEQRL ADPSSGLDAP AAILVETVQG EGGLNAASAE WLRRIAGIAK
AHGALLIVDD IQAGCGRTGT FFSFEDMGFT PDIVTLAKSL SGMGLPFALT LLRPELDQWS
PGEHNGTFRG NNHAFVTATA ALRHFWSADD FQRDIGRRAA LLETRLARIA AEHGFEVRGR
GMMRGVNVGS GELAATVTAA CFDAGLIIET SGAHDEVIKV LAPLVIDDAV LGAGLDILES
KIREAMATDY AVAAE
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