Gene Sala_2919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2919 
Symbol 
ID4081114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3066439 
End bp3067302 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content67% 
IMG OID638011304 
ProductOmpA/MotB 
Protein accessionYP_617957 
Protein GI103488396 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCGC GGCCCAACAC CCCCGTGCGC CCGATCATCG TCAAAAAGGT GATCGAGGCC 
GGGCACGGCG GACATCACGG CGGCGCGTGG AAGGTCGCCT ATGCCGACTT CGTCACCGCG
ATGATGGCCT TTTTCCTGCT CATGTGGCTG CTCGGCGCGA CGAATGAGAA GCAGCGCAAG
GCGCTCGCCG ACTATTTCGC GCCGACCATC GTCCAGAGCA AACAGGACAC GGCGGGCTCG
AACGGCCTGT TCGGCGGCGA TTCCCTGGTG TCGGTCGACA AATATCCGCA CGGCGCGGCG
CAGACGGGAA CGCGCGCGAT GACGATCCCG CGCGACGCGG TGGGCGGCCC GCGCGAGGCG
TCAGGGCGCG CGCGCGAGGC CGAGTCGAAG AGGTTCAGCC TTCTCGCCCA GTCGATGAAG
GACCGGATCC AGAGCAAGGG CGACCTCCGG CGGCTCGCGC GCAACCTGCA CTTTACGGAG
ACGATGGAGG GGCTGCGTAT CGACATCGTC GACGACGCCG ACTTTTCGAT GTTCGCGCTC
GGCACCAGCC AGCTTACCCC GGCCGGCGCG AAACTGTTCG CCGAAGTCGC GGTGCCGATC
GCCGAGGCCC CCAACCAGCT GATGATCCGC GGCCATACCG ATGCCGCGCC CTGGTCGGCG
AAGTCGGGAA CGAACAACTG GCGCCTGTCG GTCGACCGTG CCGAGGTGAC ACGCCACTAT
CTCGAGTTCC GGGGTGTCGC CTCGGATCGC TTCGCGCGAA TCGAGGGGGT CGCCGATCGC
GAACCCTATA TCCCTTCGGA CCGATTCGAC CCGCGGAACC GGCGCATCTC GATCACGCTT
GGCTGGCGCC CCGCAAGGAA TTAG
 
Protein sequence
MAARPNTPVR PIIVKKVIEA GHGGHHGGAW KVAYADFVTA MMAFFLLMWL LGATNEKQRK 
ALADYFAPTI VQSKQDTAGS NGLFGGDSLV SVDKYPHGAA QTGTRAMTIP RDAVGGPREA
SGRAREAESK RFSLLAQSMK DRIQSKGDLR RLARNLHFTE TMEGLRIDIV DDADFSMFAL
GTSQLTPAGA KLFAEVAVPI AEAPNQLMIR GHTDAAPWSA KSGTNNWRLS VDRAEVTRHY
LEFRGVASDR FARIEGVADR EPYIPSDRFD PRNRRISITL GWRPARN