| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2890 |
|---|
| Symbol | |
|---|
| ID | 4080683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 3041530 |
|---|
| End bp | 3042060 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638011274 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_617928 |
|---|
| Protein GI | 103488367 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1434] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.743347 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGC GCCTGATCTC GCTGCTGTTC CTCGTCTGGG TGCTGGGCTT CGCCTGGTTC
GCGCTGCTCC TGCCGCTGCC CGCGCCGCCG CAGAAGACGG ACGCGATCGT CGTCGTCACC
GGCGGTCCGG GCCGCATCGA CCGTGCGCTC GAACGGCTCG AGGCCGGCGA CGCGAAGCGC
CTCCTGATCA GCGGCGTCGC GCGCGAGGTC AAGCCGCGCG AGCTTGCCGC CGAATATGGG
CGTCCGGTGG CGTTGTTCGA CTGCTGTATC GCGCTGGGGT TCGACGCCGA GGACACACGC
TCGAACGCCA CCGAGGTCGC GGCATGGGCC AAGCGGCGCA AGTACAAGAG CATCCGGCTC
GTCACAACCG ACTGGCACAT GCGCCGCGCC GAATATGAAA TCGGCCGCGC GGTGGGTCGC
GATGTCACGA TCGTAACCGA CGCGGTGCGT AGCCAACCCA ATCTGGCGAC GCTGTTCCGC
GAATATCACA AATATCTCGC GGGGCTGGCG GGCGGCCTGC TCGGGCTTTA G
|
|---|
| Protein sequence | MIKRLISLLF LVWVLGFAWF ALLLPLPAPP QKTDAIVVVT GGPGRIDRAL ERLEAGDAKR
LLISGVAREV KPRELAAEYG RPVALFDCCI ALGFDAEDTR SNATEVAAWA KRRKYKSIRL
VTTDWHMRRA EYEIGRAVGR DVTIVTDAVR SQPNLATLFR EYHKYLAGLA GGLLGL
|
|---|
| |