| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2836 |
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| Symbol | |
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| ID | 4080417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2990144 |
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| End bp | 2990608 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638011220 |
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| Product | putative PTS IIA-like nitrogen-regulatory protein PtsN |
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| Protein accession | YP_617874 |
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| Protein GI | 103488313 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
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| TIGRFAM ID | [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0446547 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCTTT CTTCTCTTCT CTATCCGGCG ACGGTGCGCG CGCACGTCCA TATCGATTCG
AAAAAGGCGC TGTTTCCCTT CGTCGGCGAT CTGGCCAGTC GCTCGCTGGG TCTCGACGCC
GGCGAAGTGA GCGAAGCCTT GCTCGAACGC GAACGGCTCG GCTCGACAGG GTTCGGTCGC
GGCATCGCGC TGCCCCACGC CAAGATGGCC GACCTCGGCG GCGTGCGCGG CCTGTTCCTC
CAGCTCGCGC GGCCGATCGA CTTCAATGCT GTCGATGGCC TGCCGGTCGA CCTGCTCTTT
GTTCTGCTCT CGCCGCTCGA TGCCGGTGCC GACCATCTGA AGGCGCTGGC CGGCGTGTCG
CGGATGCTGC GCAACGAAGC GATCGCCGAA CGGCTGCGCG GCGCGAAGAA CGACGAGGCG
CTCTACGCGC TCCTCGCCGA CAGCGAAGCG CGTGACGCGG CCTGA
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| Protein sequence | MNLSSLLYPA TVRAHVHIDS KKALFPFVGD LASRSLGLDA GEVSEALLER ERLGSTGFGR
GIALPHAKMA DLGGVRGLFL QLARPIDFNA VDGLPVDLLF VLLSPLDAGA DHLKALAGVS
RMLRNEAIAE RLRGAKNDEA LYALLADSEA RDAA
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