| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2806 |
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| Symbol | rplE |
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| ID | 4080387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2966699 |
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| End bp | 2967277 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638011190 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_617844 |
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| Protein GI | 103488283 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.452001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.44759 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGACA ATTACACCCC GCGCATGAAG AAGCTGTATG ACGACAAGAT CGTCAAGGCG
ATGACCGACA AGTTTGGTTA TAAAAATGCG ATGGAAGTGC CGAAGATCGA GAAGATCACC
CTCAACATGG GTGTCGGCGA AGCCACGCAG GACAAGAAGA AGGTCGAAGC GGCCGCTGCC
GAGATGGAGC TCATCGCCGG TCAGAAGCCC GTCGTCACCA AGGCGAAGAA GTCGATCGCG
CAGTTCAAGC TGCGCGAAGG CATGCCGATC GGTTGCAAGG TCACGCTGCG CCGCGAACGC
ATGTACGAGT TCCTCGACCG GCTGATCACG ATCGCGATGC CGCGCATCCG CGACTTCCGC
GGCGTATCGG CGAAAAGCTT CGATGGCCGT GGCAACTATG CCATGGGCCT GAAAGAGCAG
ATCATCTTCC CCGAGATCAA CTATGACCGC ATCGACCAGG TGCGCGGCAT GGACGTGATC
GTCACCACCA CCGCTCGCAC CGACGAAGAG GCCCGCGAAC TGCTCAGGCT GTTCGGCTTC
CCCTTCCCGA TCGAAGCGCA GGAAAAGGAA GCCGCCTGA
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| Protein sequence | MADNYTPRMK KLYDDKIVKA MTDKFGYKNA MEVPKIEKIT LNMGVGEATQ DKKKVEAAAA
EMELIAGQKP VVTKAKKSIA QFKLREGMPI GCKVTLRRER MYEFLDRLIT IAMPRIRDFR
GVSAKSFDGR GNYAMGLKEQ IIFPEINYDR IDQVRGMDVI VTTTARTDEE ARELLRLFGF
PFPIEAQEKE AA
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