| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2707 |
|---|
| Symbol | |
|---|
| ID | 4082408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 2855023 |
|---|
| End bp | 2855448 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638011090 |
|---|
| Product | signal-transduction protein |
|---|
| Protein accession | YP_617745 |
|---|
| Protein GI | 103488184 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0517] FOG: CBS domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.44759 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCG GAGCGATTCT TCGGGGGCGA ACGGGATCTG TGATTTCGGC GCAGCCCGAC
GACACGGTGC GTGCGGTGGC CGACCTGCTG GCGCAGAACC GGATCGGCGC AGTGCCGGTG
GTTGACGGCG ATGCCGTCGT CGGCATTTTT TCCGAACGTG ACATCGTCCG CCTTATCTCT
TCCTATGGCC CCGAAGCACT CGACCGGCGA ATCGACGATG TGATGACCAA GTCGCCCATC
ACATGCGCCC CCGATATGGC GGTGATCGTG GCACTGTCAC AGATGACGCA GAAACGGATT
CGCCATCTGC CGGTGGTCGA GGGGGGCAAG ATGGTCGGGT TCGTGTCGAT CGGCGATCTC
GTCAAATATC GAATCGACCG GATCGAGGCC GAAGCGGCGG CGATGCGCGA CTATATCGCG
TCCTGA
|
|---|
| Protein sequence | MTIGAILRGR TGSVISAQPD DTVRAVADLL AQNRIGAVPV VDGDAVVGIF SERDIVRLIS
SYGPEALDRR IDDVMTKSPI TCAPDMAVIV ALSQMTQKRI RHLPVVEGGK MVGFVSIGDL
VKYRIDRIEA EAAAMRDYIA S
|
|---|
| |