Gene Sala_2666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2666 
Symbol 
ID4081874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2810792 
End bp2811442 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content67% 
IMG OID638011043 
Productpeptidase S16, lon-like protein 
Protein accessionYP_617704 
Protein GI103488143 
COG category[R] General function prediction only 
COG ID[COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTA CCGCGCCCCT CACGATTCAG CGGATCGCCA TCTTTCCGCT CACCGGCGCG 
GTGCTGTTTC CGGGGCTGCA CCTGCCGCTC CATATCTTCG AGCCGCGCTA TTCGGCGATG
GTGCAGGAGG TGCTGGCGCG CGACCGCCAG ATCGGAATGA TCCAGCCGCG CCAGATCCCC
GGCGAAGAGG ATCGCGAGCC GCCCGCGCTT TACAATGTCG GCTGTGTCGG CCGCATCGTC
GATGTCGAGG CGCTCGATGA AGGGCGCTTC AACCTGGTGC TGGAGGGCGT GGCGCGCTTT
CGCGTCCGCC GCGAGCTCGA CGTCACGACG CCGTTCCGGC AGGTCGAGGC CGAAATCGAG
CTGGAGGCCG AGGATGACGC CGTGCTGGCG AGCATCGAAC GCGCGAGCCT TGAGCGCGAG
GCCAAACGGT TCGCCGCGCG GCAGGGCTAT GTCGTCGACT GGGATTCGGT CGGCCAGCTC
GACGACGCAA CACTGGTCAA CGGAATCGCG CAGGTCGCGC CCTTCGACGC CGCGGCGAAG
CAGGCGTTGC TCGAGGCGAC CCCGATCGAT GCCCGCGCCG AGCTGGTGAT CCAGCTGATG
CAGTTCTTCG GCCGCTTCGA CAGTGACGAC GGGCGAGCGA CCTTGCAATA A
 
Protein sequence
MSATAPLTIQ RIAIFPLTGA VLFPGLHLPL HIFEPRYSAM VQEVLARDRQ IGMIQPRQIP 
GEEDREPPAL YNVGCVGRIV DVEALDEGRF NLVLEGVARF RVRRELDVTT PFRQVEAEIE
LEAEDDAVLA SIERASLERE AKRFAARQGY VVDWDSVGQL DDATLVNGIA QVAPFDAAAK
QALLEATPID ARAELVIQLM QFFGRFDSDD GRATLQ