Gene Sala_2590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2590 
Symbol 
ID4081643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2732593 
End bp2733468 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content63% 
IMG OID638010967 
Productphytanoyl-CoA dioxygenase 
Protein accessionYP_617629 
Protein GI103488068 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGAC TCGCCTCTCT CCGCGGCGCA GCGCCGGCCT GGATCGATCA ACTCCGCAAC 
AAGGGCTATT GCATCATTCC CGATGCTTTG CCGGCCGGAG CCATTGCCGC CCTCGAAGCG
GATCTGGATC CGGTCTTTGC GGCAACGCCC TTCTGCCAAG GCCGCTTCTA TGGCGAAAGC
ACCAAGCGCT TCGGCTCCCT CCTAAGGCGC TCGCGCCATG CGGCGCAGCT CGTTCTCAAT
CCGATCATCC TTGCGATGGT CGAGGAGATT CTGGGCCCAG CCTGCGACCG CATCCAGCTC
AATGTCGCCC AAGCGATCGA GATCCATCCC GGTGAAGTGC GCCAGTTTCC GCACCGCGAT
CACGATATGT GGCAGGGCGA AAAAGGAAAT CACGAATATC TCGTCAATGT GATCTGGCCG
CTGACGCCCT TCACGCGCGA CAACGGCGCG ACACAAATCT ACCCCGGCAG CCACGGGCCG
AACGGCATGG CACGCGACGA ATTGGGCGAA CCGATCATTG CCGAATGCGG TCCCGGCTCC
GCCATCTGCT TTCTCGGGTC GACGGCACAT GGTGCGGGCG CAAATCGAAC CGGCCATGTG
CGGCGCGGCA TCGTCATCGG TTACTGCCTT GGATGGCTCA AGCCCTATGA GAACCAGTGG
CTCGCCTATC CACCCGAGAT TGCCCGCACT TTCCCGCGCG AACTGTCCGC GCTTGCCCGC
TATACGCAGC ACCGGCCCAA CCTCGGCAAT TTCGAAGGCC AGTGCCCATC GATCCTGCTC
GGCGATCGCG TGCCTGAGAA CATCGGGGCG ATCGACGCGC TCCGGCCCGA TCAGGAAGCA
ATGATAGAAG GCTTCGGCCA GCCCGCTTGG GGCTGA
 
Protein sequence
MTRLASLRGA APAWIDQLRN KGYCIIPDAL PAGAIAALEA DLDPVFAATP FCQGRFYGES 
TKRFGSLLRR SRHAAQLVLN PIILAMVEEI LGPACDRIQL NVAQAIEIHP GEVRQFPHRD
HDMWQGEKGN HEYLVNVIWP LTPFTRDNGA TQIYPGSHGP NGMARDELGE PIIAECGPGS
AICFLGSTAH GAGANRTGHV RRGIVIGYCL GWLKPYENQW LAYPPEIART FPRELSALAR
YTQHRPNLGN FEGQCPSILL GDRVPENIGA IDALRPDQEA MIEGFGQPAW G