Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2590 |
Symbol | |
ID | 4081643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2732593 |
End bp | 2733468 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638010967 |
Product | phytanoyl-CoA dioxygenase |
Protein accession | YP_617629 |
Protein GI | 103488068 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGAC TCGCCTCTCT CCGCGGCGCA GCGCCGGCCT GGATCGATCA ACTCCGCAAC AAGGGCTATT GCATCATTCC CGATGCTTTG CCGGCCGGAG CCATTGCCGC CCTCGAAGCG GATCTGGATC CGGTCTTTGC GGCAACGCCC TTCTGCCAAG GCCGCTTCTA TGGCGAAAGC ACCAAGCGCT TCGGCTCCCT CCTAAGGCGC TCGCGCCATG CGGCGCAGCT CGTTCTCAAT CCGATCATCC TTGCGATGGT CGAGGAGATT CTGGGCCCAG CCTGCGACCG CATCCAGCTC AATGTCGCCC AAGCGATCGA GATCCATCCC GGTGAAGTGC GCCAGTTTCC GCACCGCGAT CACGATATGT GGCAGGGCGA AAAAGGAAAT CACGAATATC TCGTCAATGT GATCTGGCCG CTGACGCCCT TCACGCGCGA CAACGGCGCG ACACAAATCT ACCCCGGCAG CCACGGGCCG AACGGCATGG CACGCGACGA ATTGGGCGAA CCGATCATTG CCGAATGCGG TCCCGGCTCC GCCATCTGCT TTCTCGGGTC GACGGCACAT GGTGCGGGCG CAAATCGAAC CGGCCATGTG CGGCGCGGCA TCGTCATCGG TTACTGCCTT GGATGGCTCA AGCCCTATGA GAACCAGTGG CTCGCCTATC CACCCGAGAT TGCCCGCACT TTCCCGCGCG AACTGTCCGC GCTTGCCCGC TATACGCAGC ACCGGCCCAA CCTCGGCAAT TTCGAAGGCC AGTGCCCATC GATCCTGCTC GGCGATCGCG TGCCTGAGAA CATCGGGGCG ATCGACGCGC TCCGGCCCGA TCAGGAAGCA ATGATAGAAG GCTTCGGCCA GCCCGCTTGG GGCTGA
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Protein sequence | MTRLASLRGA APAWIDQLRN KGYCIIPDAL PAGAIAALEA DLDPVFAATP FCQGRFYGES TKRFGSLLRR SRHAAQLVLN PIILAMVEEI LGPACDRIQL NVAQAIEIHP GEVRQFPHRD HDMWQGEKGN HEYLVNVIWP LTPFTRDNGA TQIYPGSHGP NGMARDELGE PIIAECGPGS AICFLGSTAH GAGANRTGHV RRGIVIGYCL GWLKPYENQW LAYPPEIART FPRELSALAR YTQHRPNLGN FEGQCPSILL GDRVPENIGA IDALRPDQEA MIEGFGQPAW G
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