| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2589 |
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| Symbol | |
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| ID | 4081642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2731970 |
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| End bp | 2732596 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638010966 |
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| Product | autoinducer synthesis protein |
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| Protein accession | YP_617628 |
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| Protein GI | 103488067 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGAGG AGATCGGGGA ACGGATCGAG ATTGATGAGG ACGGGGCGTT GCGGGCGATG
TTCCGAGCGC GCAAGGAAAT CTTCATCGAC CTTCTGAAAT GGGACCTCCC CATCCTGGCA
AACGAGTTCG AGGTCGATCA GTTCGACCGC CAAGCAGAAT ATCTCATCCT GCTCGAGCAG
GGCGTCAGGC ACCGTGCGTC GACGCGATTG CTCCGGACCG ACCAACCACA TCTGCTCGGC
GACCTTTATC CGCATCTCTG CGCTGGGCCG GTGCCGGTCG GCCCGACTAT TCGCGAGATC
ACCCGTTTTT GCCTCGATCG CCACCAGCGG GCACCCGAGC GGCGCAGCGC CCGCAACCAG
CTCGTCACCG CACTTGCCGA GCATGCGCTG GCGACGGGTA TCACGTCCTA CACCGGAGTC
GCCGAGCAGG AGTGGTTCGA GCAAATCCGG CGTTTCGGCT GGGACTGCAA AGCACTGGGT
CAGCCCCTCG ATCACGAGGG CCGCCGGCTT ATCGCGCTCC ACATCCGGAT CGATGACGAA
ACGATCAGTG GCTTGCAGGC CGGCGGCACC TATGAGGCGC CGCGGTTGAT GCTGGCGGCT
CCGCGCATAG GTGGAAACGG CCGATGA
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| Protein sequence | MPEEIGERIE IDEDGALRAM FRARKEIFID LLKWDLPILA NEFEVDQFDR QAEYLILLEQ
GVRHRASTRL LRTDQPHLLG DLYPHLCAGP VPVGPTIREI TRFCLDRHQR APERRSARNQ
LVTALAEHAL ATGITSYTGV AEQEWFEQIR RFGWDCKALG QPLDHEGRRL IALHIRIDDE
TISGLQAGGT YEAPRLMLAA PRIGGNGR
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