| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2577 |
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| Symbol | |
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| ID | 4081610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2716802 |
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| End bp | 2718109 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638010954 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_617616 |
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| Protein GI | 103488055 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.996623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCCTA TGTTTGCGCC CGCCATGGCT GCGGCGCTCG TGGCTATATC GGTCACGCCC
GCTGCGGCGC AGGTGGACAA TCGGCCAGTT GCCGGCCCTA TGGCACCATC GGCGCCGCCC
GAGGTCCGCA CCGGGCCCTT ACCCGCGGTG CTAACACTCC CTCAGGCGCT TGAGGAAGCC
GAAGCCCGCT CTCCAGCTCT GGTCGCGGCT CGCGCCGATG TCGAAGCCGC GCGCGGGCGT
CTGCGCCAGG CACGCTTCCG GTACAATCCG ACCCTAAATG TCGAGGTCGA AAATTTTGCC
GGAACGGGTC CCTATTCGGG CTTCAACGGC ACCGAAACGA CGGTCTCGGT CAATCAGAGG
CTCGACATCG GCGGCAGGCG AAGAGCGCGG ATGACGCTTG CCGAGGCCGA ACTTGCTGCA
CAGGAATACC GCTTCGCGAT CGCCCGTGCC GAACTTGGCC GACAAGTCCG CGATCTCTTC
GCATTCGGTA TAGCCGCGCG CGACAACCTG GCGCTTGCGC GGGAAAATGA GGGGCGCGCG
CGCGAGCTAT CGCGGATTGC GCGCGAACTT GTCGACGCGG GGAAGGAGCC TCCTCTGCGG
GGGATGCGAG CCGACGCGGC GCTTGCCCAG GCGACAGCGG CGCTTCGGGC GGCCGAGGCT
GATGAAGTGA ATGCTCGTCG CTCGCTCGCG GCGCTCTTCG GCGTAGACAC ACCGCCGGCC
GAGCTGAGCG GTAGCGACCT GCTGGCACCG CCCCGGAACG TCGATGCAAT GGCGACGCTC
GACGTTCGAC TTGCCGAAGC CGAGCGGGTC ATTGCTGATG CGCAATTGCG CCAGGCCCGC
GCGGAGGGTC GACTCGATCC GTCCGTCGGC GTGGGAGTGC GCCAGTTGCG CGAAACCGGA
GACCGGGCGC TGATTGCCAG CCTTTCGGTG CCGCTGCCGG TTTTCGATCG CAACCAAGGC
AACATCGCGG CGGCGCGGTC AGAAATTCAG TCGGCCGAAG CGCGGCGCAA CCGTGTTCTC
GCCAACACGC AGGCGGAAAT CGCCAACGCG CGCGCGGCAT TGGCAGCCGC CGAGGCACGC
GTCATAGCGC TTGAAGGCAG CGGCATTGGG CAGGCGCGCG AAGCATTGCG GCTTGCGCAG
CTATCGTATC GGGCCGGCAA ATCCTCATTG ATCGAGCTGC TCGATGCTCA GCAGGCTTAT
GCTTCGACCC AGGCTGAGCT CATCGCGGCG CGACGGGCGC GGGCCGAAGC TCAGGCCACG
CTGGCGCGCC AGGCTGCGGC GGCGAGCGAT GTGGATATGG GACAATGA
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| Protein sequence | MHPMFAPAMA AALVAISVTP AAAQVDNRPV AGPMAPSAPP EVRTGPLPAV LTLPQALEEA
EARSPALVAA RADVEAARGR LRQARFRYNP TLNVEVENFA GTGPYSGFNG TETTVSVNQR
LDIGGRRRAR MTLAEAELAA QEYRFAIARA ELGRQVRDLF AFGIAARDNL ALARENEGRA
RELSRIAREL VDAGKEPPLR GMRADAALAQ ATAALRAAEA DEVNARRSLA ALFGVDTPPA
ELSGSDLLAP PRNVDAMATL DVRLAEAERV IADAQLRQAR AEGRLDPSVG VGVRQLRETG
DRALIASLSV PLPVFDRNQG NIAAARSEIQ SAEARRNRVL ANTQAEIANA RAALAAAEAR
VIALEGSGIG QAREALRLAQ LSYRAGKSSL IELLDAQQAY ASTQAELIAA RRARAEAQAT
LARQAAAASD VDMGQ
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