| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2559 |
|---|
| Symbol | |
|---|
| ID | 4081474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 2698830 |
|---|
| End bp | 2699516 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638010936 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_617598 |
|---|
| Protein GI | 103488037 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGGA CCGAAAGGCC AGCATCGCCA GATGTGCGTT TCACGCCCGC CCTCGGGCGA
GCCGGACTGA CCGGCGCCTA TGATTTCGCG ATCAAGCTGC TGACCCGCGA GCGGCTGTGG
CGAACCGCGC TCCTCGAGCA ATTGGCGCCG CGCAACGGCG AGACGATCCT TGATGTTGGC
TGCGGCACGG GCAGCTTTGC GCTTCTGATG AAATGTCGGG CGCCGGGTGC CCGGATCATA
GGGCTGGATC CTGATCCGGA CGTTCTTCAT CGCGCCGAAG CCAAGGCGAG AAAGGCGGGC
GTGGAGATCG AGTGGCGGCA AGGCTTTGCA AGTGATGCCG CCACTTTGGG CGTGCGCTTC
GACAAGACGG TCTCCAGCCT TGTGTTTCAC CAGGTATCGA TCGTTGGAAA GCGAAGTGGG
ATTGCGGCAA TGGCCGAAGC CCTGAAGCCT GGCGGGGAAC TTCACATCGC CGATTACGCG
GCGCAAACAT CGCCACTGAT GCGGTCGCTG TTCCGGCTGA CTGTGCAGCG CCTCGACGGC
CTCGCCGACA CCCAGCCCAA CGCCGATGGC GCTATCGAGG CCATTCTGGC CGACTTGGCG
CGCGCGCCGG TGGTCCCCCG GCGGGTGATT TCGACCCCCA CCGGCGCGAT CAGCCTGTTC
CACTTCAAGG CACCCAAAAG CATATAA
|
|---|
| Protein sequence | MSRTERPASP DVRFTPALGR AGLTGAYDFA IKLLTRERLW RTALLEQLAP RNGETILDVG
CGTGSFALLM KCRAPGARII GLDPDPDVLH RAEAKARKAG VEIEWRQGFA SDAATLGVRF
DKTVSSLVFH QVSIVGKRSG IAAMAEALKP GGELHIADYA AQTSPLMRSL FRLTVQRLDG
LADTQPNADG AIEAILADLA RAPVVPRRVI STPTGAISLF HFKAPKSI
|
|---|
| |