| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2526 |
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| Symbol | |
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| ID | 4081500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2662586 |
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| End bp | 2663212 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638010904 |
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| Product | autoinducer synthesis protein |
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| Protein accession | YP_617566 |
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| Protein GI | 103488005 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCAC AATCGACGCG GGCGCCCGAC GCGCCCGGGG ATGCCGCGCT GCGCGGCATG
TTTGCCGCGC GAAAGCAGGT CTTCATCGAC CAGCTCAAAT GGGATTTGCC CGTCCTCGAC
GGCCGTTTCG AGCTGGATCA GTTCGACACG CCCGACGCTC GTTATCTGAT CCTGCTCGAC
CCGCACGATC TGCGTCATCG TGCTTCGGCG CGGCTCCTGC CCACCACGGC GCCGCACCTT
CTCGGCGACA TCTATCCGCA TCTCTGCACC GATGGCCCGC CGACCGGCAC CAGTATGTGG
GAGATAAGCC GCTTCTGCCT CGACCCCGCG CAGACGCCCG ACGAGCGCCG CGACGCGCGC
AACCAGCTCG TGACCGCAAT TGCCGACTAT GCGCTGAACA ACGGGATAAA TGAATATGCC
GGGATCGCCG AGGCGGGCTG GTACCATAGT ATCAGCAAGT TCGGCTGGGT TTGCCGCACG
CTGGGACCCG TCCACCGAGA TACAAATTGC CGGATCGTCG CGTTCAACAT CACGATCGAC
GAAGACACGC TCCCCGGCCT GAAACGAACG GGGACCTATG CGCCGCTCAT GCTCAAATAT
GAGGAAGGCG GGGAGCCGGC GCTATGA
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| Protein sequence | MIAQSTRAPD APGDAALRGM FAARKQVFID QLKWDLPVLD GRFELDQFDT PDARYLILLD
PHDLRHRASA RLLPTTAPHL LGDIYPHLCT DGPPTGTSMW EISRFCLDPA QTPDERRDAR
NQLVTAIADY ALNNGINEYA GIAEAGWYHS ISKFGWVCRT LGPVHRDTNC RIVAFNITID
EDTLPGLKRT GTYAPLMLKY EEGGEPAL
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