Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2468 |
Symbol | |
ID | 4081306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2607632 |
End bp | 2609509 |
Gene Length | 1878 bp |
Protein Length | 625 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638010846 |
Product | oxidoreductase FAD-binding region |
Protein accession | YP_617508 |
Protein GI | 103487947 |
COG category | [C] Energy production and conversion |
COG ID | [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.82591 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.524788 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAAAT CATTCCGCTT CGGCCTGTGC GTGGCGATGA CGTTTCTGAC GGCATCGATC GTCCATGCGG AGGACGCCGA CGAGCATGCC GCCCATCATG GGAGTGCCTC GCCGCCTGGC GGCGTGGCGG TTGGCAGCAT GGCGTCATCC GGGATGAAGC CCGCGGGCGA AATGCAATCG ATGATGGGCG AAATGATGGA AGGCGAGCAT GGCGGCCGCC GCCAGTCTCC TTTCTTCTCG CAATTGCTCG CGCTACCGGC ACTCGATGAC GCGGCGAGGC AAGCCCTGCT GCGGCAAGCC GAGCAACGGT CGCATCGAGG GCTGATGCTG ATCTCCGAGG CCGCCCGCGC AGCCGCGCAC GCCGAAACGG CGACCGAGCA AATCGCCGCC GTGCGCAATC TTCGCGAAGG CAGCGATCTT CTCGATAGCG GTGCGGCTGC CCGGATGGCC CTCGCCGGGA CCGGAAAGCC GGCGGGCGCC GCGATGAACT GGTTCCGCGA TCGCCTGTCG ATCGAGCCGG ACGAGACGCA CGCGGCCCAT CCTTTCGGCC TGTCTCCCTC CCACCTGCTG CTGATGCTGT TCCTCCTCTT GCTGAGTACC GGCCTCGCCG CGTTGCAGCT ACTTCGTCTC AAGCGCATCC GTCAGATCGT CGCAGCCAGG AAAGGAACCG CGAAGGTCGC CAACACGCAA CCGTCGCCGG CCGCAGCTCC GGAGATGCAG GCCGCTACGG CCGGAGCGCT CGCGCCAAGC AACGCGCCCG CCCCGGCCGG TGCTTCGCTG CGCAAGCCCC GGCCCTGGTC CGGACCGCTG CGGGTGACGC GGATCATCCG GGAGACGCCG ACCATCAGGA CCTTCCGTCT CGCAGATCCC GCAGCCGACC GGCTGCCTTT CGATTTCCTG CCCGGTCAGT TTCTGCAAAT CGAGGTCGAG CCCGAGCCCG GCAAGCGTGC CCGCCGATCC TACACTATCG CTTCGTCGCC GACGCAGCGG GCCTATGTCG AACTGACGGT GAAGCGCGAG GAGCAGGGAG CGGTGTCCCG CCACCTGCAC GACACGCTCA TTGTCGGGGA TCTTGTTCGA GCCTCGGGCC CTTTCGGCTC CTTCACCTTC ACTGGGACGA CCGCGGATAG TATCGTGCTC ATCGCGGGCG GTGTCGGGAT CACGCCGATG ATGTCGGTAT TGCGCTATCT TACAGACACC GCCTGGCCGG GCGAGATATT CTTCCTTTAT GGCGCTCGGT CCACGGACGA GTTCGTCTTC CGTGACGAAA TCGAGCGACT CGAGCGGCTT CATGACAATC TGCATGTCTT CGCCGCGATG GAGCGCTCGC CAGGGACGGT CTGGCATGGC GCCGTCGGCC CCCTGACGCG GGACATGCTG CTTTCGGCCG TCCCCGACAT CGCGCGCCGC CGCATCCACC TGTGCGGTCC CCCCGCGATG ATGGCGGCGA TGAAGGCGGA GCTCGCCGAG CTCGGCGTGC CGGAAGTGCA ACTTCATACC GAAGCCTTTG GGCCCGCATC GCTGCCCATC GATCCAGTCG ACGCGCCCAG CGCGCCCGGC AACGATGCAA GTCGCACGGT ACAGCCTCCG TCCGCGCCTT CCACAAGGAT TGCCGAAGCT TCCGTGACGT TCGCTCTGTC GGGTGTGTCC GCCGCCCTGG CTGGCGATCA GACCGTGCTC GAAGCCGCCG AGGGGGTTGG CGTCGAGATA CCCTATTCCT GCCGCACCGG AGACTGCGGA CTATGCGTCA CCAAGCTGCT CGACGGTGAA GTCACGATGG CGAACGAAGC GGGCCTGGCG CCGGAAGACA AGGCGAACGG CTATATATTG GCTTGCCAGG CCAAAGGCAG CGGCAAGCCG ATCGTGGTTG AAGCCTGA
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Protein sequence | MQKSFRFGLC VAMTFLTASI VHAEDADEHA AHHGSASPPG GVAVGSMASS GMKPAGEMQS MMGEMMEGEH GGRRQSPFFS QLLALPALDD AARQALLRQA EQRSHRGLML ISEAARAAAH AETATEQIAA VRNLREGSDL LDSGAAARMA LAGTGKPAGA AMNWFRDRLS IEPDETHAAH PFGLSPSHLL LMLFLLLLST GLAALQLLRL KRIRQIVAAR KGTAKVANTQ PSPAAAPEMQ AATAGALAPS NAPAPAGASL RKPRPWSGPL RVTRIIRETP TIRTFRLADP AADRLPFDFL PGQFLQIEVE PEPGKRARRS YTIASSPTQR AYVELTVKRE EQGAVSRHLH DTLIVGDLVR ASGPFGSFTF TGTTADSIVL IAGGVGITPM MSVLRYLTDT AWPGEIFFLY GARSTDEFVF RDEIERLERL HDNLHVFAAM ERSPGTVWHG AVGPLTRDML LSAVPDIARR RIHLCGPPAM MAAMKAELAE LGVPEVQLHT EAFGPASLPI DPVDAPSAPG NDASRTVQPP SAPSTRIAEA SVTFALSGVS AALAGDQTVL EAAEGVGVEI PYSCRTGDCG LCVTKLLDGE VTMANEAGLA PEDKANGYIL ACQAKGSGKP IVVEA
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