Gene Sala_2455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2455 
Symbol 
ID4081332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2596523 
End bp2597548 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content66% 
IMG OID638010833 
Productalcohol dehydrogenase GroES-like protein 
Protein accessionYP_617495 
Protein GI103487934 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0402803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.851382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAAA CCATGAAGGC GGCGGTCGTC CGCGAATTCG GTAAGCCGCT GGTCATCGAA 
GAAGCGCCGA TCCCGACGGT CGGACCCGGC CAGATCCTGG TAAAGGTCGC GGCGGCCGGC
GTATGCCACA CCGACCTGCA TGCGGCCGAG GGCGACTGGC CGGTCAAGCC CAACCCGCCC
TTCATTCCCG GGCATGAAGG CGTCGGACAT GTCGCCGCCG TCGGATCGGG CGTCACTCTC
ATAAAAGAGG GCGACCGGGT CGGCGTCCCC TGGCTCTACT CCGCCTGCGG GCATTGCGTG
CATTGCCTGG GCGGCTGGGA GACGTTGTGC GAGAGCCAGC AGAATACCGG CTATTCGGTG
AATGGCAGCT TCGCGGAATA TGTCCTCGCC GATCCAAATT ATGTCGGGCA TCTTCCCGAC
AATGTCGACT TCCTCGACAT CGCGCCGATC CTCTGCGCCG GCGTCACCGT CTATAAAGGG
CTGAAGGCCA CCGAGGCGAA GCCCGGAGAG TGGGTGGTCG TCTCCGGGAT CGGCGGGCTC
GGCCACATGG CGGTGCAATA TGCCCGCGCG ATGGGTCTCA ATGTGGCGGC GGTCGACGTC
GACGACCGCA AGCTCGATCT CGCGACCCGT CTCGGCGCGG CGCTCACGGT CAACGCGCGC
GAGGAGGATC CGTCAGCCGC CATCAAGCAG GCGATCGACG GTGCGCAGGG CGTCCTCGTC
ACCGCGGTCT CGCCCAAGGC CTTCCAGCAG GCGCTCGGCA TGGTCCGGCG CGGTGGTACG
GTCGCGCTCA ACGGCCTTCC ACCGGGCGAT TTTCCGCTGT CGATCTTCGA CACCGTACTC
AACGGCATCA CCGTTCGCGG TTCGATCGTC GGCACCCGGC TCGACCTTCT CGAAGCACTG
GCCTTCGCCG GCGAAGGCAA GGTGCATGCG ACGGTGCACG CCGAAAAGCT GGAGAACATC
AACGACGTCT TTGCGCGCAT GCGCCGCGGC GACATTGACG GGCGGATCGT TCTCGATCTG
GCCTGA
 
Protein sequence
MAKTMKAAVV REFGKPLVIE EAPIPTVGPG QILVKVAAAG VCHTDLHAAE GDWPVKPNPP 
FIPGHEGVGH VAAVGSGVTL IKEGDRVGVP WLYSACGHCV HCLGGWETLC ESQQNTGYSV
NGSFAEYVLA DPNYVGHLPD NVDFLDIAPI LCAGVTVYKG LKATEAKPGE WVVVSGIGGL
GHMAVQYARA MGLNVAAVDV DDRKLDLATR LGAALTVNAR EEDPSAAIKQ AIDGAQGVLV
TAVSPKAFQQ ALGMVRRGGT VALNGLPPGD FPLSIFDTVL NGITVRGSIV GTRLDLLEAL
AFAGEGKVHA TVHAEKLENI NDVFARMRRG DIDGRIVLDL A