| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2432 |
|---|
| Symbol | |
|---|
| ID | 4081138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 2569656 |
|---|
| End bp | 2570933 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 638010811 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_617473 |
|---|
| Protein GI | 103487912 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.323956 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCG ATCTTGTTCG CGAACTGATC GAGCGCTGGC GCGGCGATTC CGGCTCGACC
TATCAAAGCT GGTTCCTGTG GGAGGAACGA CTGAAGAATT TTCGGTCGAT CAGAAGAGGA
ATCTCGCAGG TCGTCGCCGA AATTGAGGCC GGCACCTTCG GAGCGGCATA TCGGGGCTCG
TCATTGGAGA TCATTGTTCA TTCAATCGCC GAGCAACGAC AGATTTTCAA AGGTGCGGAT
CATGCTTTCT TGTGGAAGCC CAAACTCCGA ATCCCGGATA TCTACGAGAA CGCCGACAAT
CAACGAGCTT TTGGCAGACT TCTTCACCAT TGCTCCTGTT GCGATACCGC CGAGGAGGTC
GTCGCCGGGA TCCTCGCAAT CGACAGACAG AAGATCAAGG GGTTGGGTCC TGCGGTAGCC
AACATTCTCT ATTTTCTGCA TCCCACCCTT GTGCCTCCGT TCAATACGGC AATCGTAAAG
GGCTACAACG CGCTGACGGG TGCGAATGTG AAGCTTGGCA GCTGGGAGCA TTTTCTCGCG
ATGCGCGCGG GCATTCTGGA TCTCAACGAT TGCTACCGGG ATCTTCTCTC CAACGATTTG
GGCGCGATAG GAGGGCTGCT GTTCGATATC GGATCGGGAC GGTTTCCAGC CCCACCGCTC
AGCGGTTCGA GCGAAAATGC TCGCGATTGG ATGGCCTTGC TGAATGAAAC GCGCTCACAG
TCCGACAAGT TCGATAAGGG GCTTGCAAAT CAGAAAGAGA GCGACCGGAC GCATAGCGAA
GTCCAATCCT GGCTTCGGGA CCTCGGCCTT GCACTTGGAT ATGACGTCTG GGTAGCGGCA
AATGACCGGG GGCGCCTTCA TGAGGGTGTA CCGCTCGGGT CTCGATGCCT CGATAGCTTG
CCGCATGCCA TCGCAACCGC TCAAGGAAGC GATGCCATAA GACTGATCGA CATCTTATGG
CTCGAGCAAT CGACGGCTAC GGTCGCGGCG GCATTCGAAG TCGAGCATTC GACATCCATT
TATTCCGGAA TTGTCCGCAT GCTTGATCTC GCGCTGAGCA GCGAGAATCT TCATTTGTCG
ACGCCACTTT TCCTGGTTGC ACCCGATGCG CGAGAAGCCG ATGTCCGCGC TCAGCTCCGA
CGCCCGGCTT TCAGCCGGAT CGGTGATCTC GACATTTCCT ACCTGCCCTA CGCCGAGCTC
GAACAGAACA GGGTCGCCAT TGCCCGCTTC GGTACGGGCC TGAAGGCGAT CAAGGCGATC
TCCCATCCAT TGCCGTGA
|
|---|
| Protein sequence | MKRDLVRELI ERWRGDSGST YQSWFLWEER LKNFRSIRRG ISQVVAEIEA GTFGAAYRGS
SLEIIVHSIA EQRQIFKGAD HAFLWKPKLR IPDIYENADN QRAFGRLLHH CSCCDTAEEV
VAGILAIDRQ KIKGLGPAVA NILYFLHPTL VPPFNTAIVK GYNALTGANV KLGSWEHFLA
MRAGILDLND CYRDLLSNDL GAIGGLLFDI GSGRFPAPPL SGSSENARDW MALLNETRSQ
SDKFDKGLAN QKESDRTHSE VQSWLRDLGL ALGYDVWVAA NDRGRLHEGV PLGSRCLDSL
PHAIATAQGS DAIRLIDILW LEQSTATVAA AFEVEHSTSI YSGIVRMLDL ALSSENLHLS
TPLFLVAPDA READVRAQLR RPAFSRIGDL DISYLPYAEL EQNRVAIARF GTGLKAIKAI
SHPLP
|
|---|
| |