| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2421 |
|---|
| Symbol | |
|---|
| ID | 4080859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 2558106 |
|---|
| End bp | 2559317 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638010800 |
|---|
| Product | copper resistance B precursor |
|---|
| Protein accession | YP_617462 |
|---|
| Protein GI | 103487901 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3667] Uncharacterized protein involved in copper resistance |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.754821 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGGG TCGCGCTTCT CCTCGCGGGT ATCGCCCCGC TGGCCTTTGC TGTGCCCGCC
GCGGCGCAGT CGATGGATCA TTCGATGCAT GGTGCGGCGC CCGCGCCGAC ACCCGCTCCC
TCGCCAACGC CAGCACCCGT AGCGCAGTCC GCGCCCGAAG CGCCCGCCGA AGGGTCGATG
GAGCAGATGG ACCATGGGAA CATGCAGGGC ATGGACATGG AACCCGAGGC TTCAAGCTGC
CCGCCCGAAC ATGCGGCGAT GGGTCATTGT ACGCCTGAGG CGGAAGCTCC AGGCAAGGGC
GCTTCGGACA TGGGTGCGAT GGATCATGGC GCACCGCAGC CGTCCGATCC CGATTGCCCG
CCCGAACATG CCAAAATGGG CCATTGCACC CCGAAGGGCG GATCTGCGGA CGCGATGGCG
GGAATGGAAG GCATGGCGAC CACGAGCAGC GCTAGCGGCA CCGATTTGCC GCCGGGCGAT
GCTACCGCGC CTGCGCCTCC CGGCGACTGG TATGCCGATC GCATTTATCC CCAAGCCGAA
ATGGAGCATT CGCGCCACGA CATGATGAAA GAGAATGGTG CGCAGACCAT CGCTTTCATC
AGCTTCAACC TTGCCGAATA TCAGGCGCGC AAGGGCCGCG ACGGGTTCCG CTGGGACGGT
GAGGCTTGGT ACGGCGGCGA CATTAACCGG CTGACGATCA AGAGCGAAGG CGAGGGCGTG
TTCGGCGAAG GCATCGAGAG CGCCGAGGTA CAGGCGCTCT ACAGCCGGGC GATCGGACCC
TATTTCAACG CGCAGGCGGG TATCAGGCAG GATCTTGGGC CCGGCCCCGA CCGCACCTAT
GCGACGATCG GCTTCGAGGG GCTCGCCCCC TATTGGTTCG AAGTCGAGGG CGCGCTGTTT
CTTTCGAACA AGGGTGATCT GCTCGCCCGG CTCGAAGGCT ATTACGACCA GCGCATCACC
CAGAAACTGA TCCTCCAGCC GATGGCGGAG GTCAATTTTG CGCTCCAGGA TGTCCCCGAG
ACCGGCGTTG GTTCGGGGCT TTCGGATTTC GAGCTCGGGC TTCGCCTGCG TTACGAGGTC
GTGAAGGAAT TCGCGCCTTA TGTCGGCGTC GAATGGGCGC GCAAGGTCGG CGATACCGCG
CGTTTTGCCC GCGCCGCGGG CGAGGATGCG AGCGGCGTCA GCTTCGTGAT GGGGGTGCGG
GCCTGGTTCT AG
|
|---|
| Protein sequence | MTRVALLLAG IAPLAFAVPA AAQSMDHSMH GAAPAPTPAP SPTPAPVAQS APEAPAEGSM
EQMDHGNMQG MDMEPEASSC PPEHAAMGHC TPEAEAPGKG ASDMGAMDHG APQPSDPDCP
PEHAKMGHCT PKGGSADAMA GMEGMATTSS ASGTDLPPGD ATAPAPPGDW YADRIYPQAE
MEHSRHDMMK ENGAQTIAFI SFNLAEYQAR KGRDGFRWDG EAWYGGDINR LTIKSEGEGV
FGEGIESAEV QALYSRAIGP YFNAQAGIRQ DLGPGPDRTY ATIGFEGLAP YWFEVEGALF
LSNKGDLLAR LEGYYDQRIT QKLILQPMAE VNFALQDVPE TGVGSGLSDF ELGLRLRYEV
VKEFAPYVGV EWARKVGDTA RFARAAGEDA SGVSFVMGVR AWF
|
|---|
| |