| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2389 |
|---|
| Symbol | |
|---|
| ID | 4080542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 2521467 |
|---|
| End bp | 2523137 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638010769 |
|---|
| Product | leucyl aminopeptidase |
|---|
| Protein accession | YP_617431 |
|---|
| Protein GI | 103487870 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0260] Leucyl aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0738051 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGCC GATGTCGTTC GTCGAGCCCG ATTTGCGGAC GGGCTGGAGG CAGCTATGCA
GGACGCAGGT CGTCAAACAA CGGGGATTAT CGAACGATGC GCATGAAAAC ACTGCTTCTT
TCCGCTTGCC TGTCGCTCGC CTTCACGCCC GGCGCGATGG CGCAAACCGT GATCGGGTCG
GGCGTTGTCC CGGCGAACGC CGCGAACAGC GCCGAACGCG CGATCGGCTT CGCATCGCGC
GCGCCGACGG GCGCCGCGCT CGTCATTGTG ATGACCGACG CCGCGCTGCC GCCGCTCGAT
GGCGTCGCGC TCTCCGCGCC CGAGCGGCAG GCAGTCGAGG CCGCGATCGC CGCCGCGAGC
TTCGACGGCA AGGCGGAATC GACGCTGTCG CTGCGCGGCA TCGGCGCGCA TCCGCGCATC
CTGCTCGTCG GCGCCGGGCC GGCGCCCTCG TCGCTCGCGC TCGCCGAAGC GGGCGGCAAG
GCGGCGCAGG AGATGAAGGG CGAGGCGCAT CCCGTGGCGA TCGCCGGCGC CTTTGGCGAC
ACCTCCGCCG CCGAGGTCGC TTATGGCTTC GCGCTCGGCC AATATCGTTT CGACCGCTAC
AAGACGGTCG ACCGCAAGAC GCCGCCCTCC GCCGCGGTCA CGCTCGTCGG CGCCAATCCC
TCGACCGCCG AGACCGCCTT TGCGACGCGC TGGCAGCCGC TCGTCGACGG CGTGCGCCTG
TCGCGCGATC TGGCCAACGA GCCCGCGAAC GTCATCTACC CCGAAAGCTT CGTTGCGCGC
GTGCGTGCGG CGTTCGCGGG CGTTCCGGGC GTCAGCATCG AGGTGCTCGA CGAAGCGGCG
ATGCGGCGGC TCGGCATGGG CACGCTCGTC GGCGTGGGCC AGGGCAGCCC GCGCGGCTCG
CGCCTGCTCG CGGTGCGCTA CCGCGGCGTG GGTGCGCCCG CCGCACCGCT GGCGTTCGTC
GGCAAGGGCA TCACCTTCGA TTCGGGCGGC ATTTCGCTCA AACCCGGCAC GGGCATGTGG
AACATGAAGG GCGACATGTC GGGCGCCGCG TCGGTCGTCG GCGCGGCGCT GTCGCTCGCC
AAGTCGCGCG TGCCGGTGCA TGTCGTCGCG GTCGCGGCGC TTGCCGAGAA TATGCCCGAC
GGCAACGCGC AGCGTCCGGG CGACGTCGTG CGCACCCTGT CGGGCAAGAC GATCGAGATG
CTGAACAGCG ACGCCGAGGG CCGCCTCGTC CTCGCCGACG CTAATGAATA TGTCGCGCGC
GAATATAAGC CGCGCGCGAT CGTCAATATC GCGACGCTCA CCGGGTCGAT CGTCGGTGCA
CTCGACGACC GATATGCGGG CCTCTTTTCG CGCGATGACG AGCTTGCCGC CGCGCTGCTC
GCCGCCGGAA CCGCCAGCGG CGAGGAGCTG TGGCGGATGC CGCTGCACCG GGATTATGCC
GACAAGCTCA AATCGGACAT CGCCGACATC CGCAACATCG CGGCGGGCCA GGGGCCGGGC
GCGAGCCTCG GCGCGCATTT CATCGGCTTC TTCGTCGATG AGGACATGCC ATGGGCGCAT
CTCGACATCG CAGGCGTCAA CCGCAGCGAA TCGGCAAGCC CGCTCGTGCC TAGGGGGATG
ACGGGCTTCG GCGTGCGTCT GCTCGACCAG CTGGCGCGCG GCGGGGAGTA G
|
|---|
| Protein sequence | MASRCRSSSP ICGRAGGSYA GRRSSNNGDY RTMRMKTLLL SACLSLAFTP GAMAQTVIGS
GVVPANAANS AERAIGFASR APTGAALVIV MTDAALPPLD GVALSAPERQ AVEAAIAAAS
FDGKAESTLS LRGIGAHPRI LLVGAGPAPS SLALAEAGGK AAQEMKGEAH PVAIAGAFGD
TSAAEVAYGF ALGQYRFDRY KTVDRKTPPS AAVTLVGANP STAETAFATR WQPLVDGVRL
SRDLANEPAN VIYPESFVAR VRAAFAGVPG VSIEVLDEAA MRRLGMGTLV GVGQGSPRGS
RLLAVRYRGV GAPAAPLAFV GKGITFDSGG ISLKPGTGMW NMKGDMSGAA SVVGAALSLA
KSRVPVHVVA VAALAENMPD GNAQRPGDVV RTLSGKTIEM LNSDAEGRLV LADANEYVAR
EYKPRAIVNI ATLTGSIVGA LDDRYAGLFS RDDELAAALL AAGTASGEEL WRMPLHRDYA
DKLKSDIADI RNIAAGQGPG ASLGAHFIGF FVDEDMPWAH LDIAGVNRSE SASPLVPRGM
TGFGVRLLDQ LARGGE
|
|---|
| |