Gene Sala_2377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2377 
Symbol 
ID4080817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2498604 
End bp2499362 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content68% 
IMG OID638010757 
Producthypothetical protein 
Protein accessionYP_617419 
Protein GI103487858 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.191266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.04733 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGC TCGCCGATCC GGTGACGCTG GCGGTGCTCG TCGCCGCGGT CGTGCTGCTC 
GGCATGGCGA AGGGCGGGCT GGCGGGGGTA GGCGCGCTCG CGACGCCGCT CGCCGCGCTC
GTGCTGCCGC CCGCGACCGC GGCGGCGCTG CTGCTGCCGA TCCTGATCGT GCAGGATGTC
ATCAGCGTCT GGTCGTTCCG CAAGACGTGG GATGGGTGGA TCATCGGCTG GATGCTGCCG
GGCGCAGCGC TCGGCATTTT GGCGGGCTAT GTCTATGCCG AGCGCGTGAA CGAGGCGCAG
CTGATGGCGG CGCTCGGCGC GATCACGCTC GCTTTTGGTC TCTATCGCCT GTGGGTCGAG
CGCGGCGGGC GGATCGTCGC CGCGTCGCGC TCGCCGGGCT GGGTCGGGAC GATCTTTGGC
GCCGTCATGG GGCTGACGAG CCAGATTGCG CACGCGGGCG GGCCGCCGTT CCAGATGTGG
GTGACGCCGC GCAAGCTGCC GCACCTGACC TTCATCGGGA CGAGCGCGAT CCTCTTTGCC
ATCGTCAACT GGATGAAGGT GCCCGCCTAT CTGGCGCTCG GCGCCTTTCC GCATGAGGTG
GTCGTCGCGG CGCTGCTGCT GATGCCGCTC GCGATCGTCT CGACGCTGCT CACGGTGCGC
TGGATGAAGG CGATGCAGCC CGAACGCTTT TATGCGCTCA TCTATGGGCT GATGGTGCTG
CTTGGCGCGA AGCTGCTATG GGACGGGCTT GGCGGATGA
 
Protein sequence
MNLLADPVTL AVLVAAVVLL GMAKGGLAGV GALATPLAAL VLPPATAAAL LLPILIVQDV 
ISVWSFRKTW DGWIIGWMLP GAALGILAGY VYAERVNEAQ LMAALGAITL AFGLYRLWVE
RGGRIVAASR SPGWVGTIFG AVMGLTSQIA HAGGPPFQMW VTPRKLPHLT FIGTSAILFA
IVNWMKVPAY LALGAFPHEV VVAALLLMPL AIVSTLLTVR WMKAMQPERF YALIYGLMVL
LGAKLLWDGL GG