| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2343 |
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| Symbol | |
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| ID | 4080590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2470343 |
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| End bp | 2470960 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638010723 |
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| Product | 3'-5' exonuclease |
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| Protein accession | YP_617385 |
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| Protein GI | 103487824 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.151538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTAT ATTTCCACGA AGAAGACCTG CCCGAAGATG TGCTGGGGCC TGGCGCGGTC
GCGGTCGATA CCGAAACCAT GGGGCTCAAT CCGCTGCGCG ACCGGCTGTG CCTCGTCCAG
ATCAGCGACG GGTCGGGCGA CGAGCATCTG GTTCGTTTCA GGCCCGGCAG CAGCTACGAC
GCGCCGGTGC TGAAGGCGAT CCTCGCCGAC CCGGAGCGGC TGAAACTCTT TCATTTCGCG
CGTTTCGACA TCGCCGCGTT GCAGCAGGCA CTCGGCGTCG TGACGACGCC CGTCTATTGC
ACCAAGATCG CCTCGAAGCT GGTGCGCACC TATACCGACC GCCATGGCCT CAAGGAACTG
GTGCGCGAGC TGCTGGGGCA GGAGGTGTCG AAGCAGCAGC AGTCGAGCGA CTGGGGCGCC
GCCGAACTCA GCGAGGCGCA GCGCGACTAT GCCGCGAGCG ACGTGCGGTT CCTGCACGCG
ATGAAGGAGA TCCTCGACGC GCGGCTGGCG CGCGAGGGGC GCACCGAATT GGCGCAGGCC
TGTTTCGATT TCCTGCCGAC GCGCGCGGCG CTCGACCTCG CGGGATGGCC CGAGGTCGAT
ATTTTCGCGC ACAGTTGA
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| Protein sequence | MSVYFHEEDL PEDVLGPGAV AVDTETMGLN PLRDRLCLVQ ISDGSGDEHL VRFRPGSSYD
APVLKAILAD PERLKLFHFA RFDIAALQQA LGVVTTPVYC TKIASKLVRT YTDRHGLKEL
VRELLGQEVS KQQQSSDWGA AELSEAQRDY AASDVRFLHA MKEILDARLA REGRTELAQA
CFDFLPTRAA LDLAGWPEVD IFAHS
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