| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2328 |
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| Symbol | |
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| ID | 4080575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2455375 |
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| End bp | 2457735 |
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| Gene Length | 2361 bp |
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| Protein Length | 786 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638010708 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_617370 |
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| Protein GI | 103487809 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCAC GGGCATCATT GCTCGCGGGC CTGTCTTCGC TTGCGCTTGT CGCGACCCCG
GCCACGGCGC AGGACGCCGC TGCCGAGGAT GACGGCAACA TCATCATCGT CACCGCGACG
AAGCGCGACG CCAATCTTCA GGACATTCCC TTTTCGATCA ACGCGCAAAC CGCCGAGGAC
ATCCAGAAAT CGGGCGCGGT GACGCTCGAG GATCTGTCGC GCAACGTCGC GGGACTGTCG
GTCCAGAACC TCGGGCCGGG GCAGAGCCAG GTGTCGGTGC GCGGCGTGTC CGCCGGGCAG
GTCGTGCGCG ACCAGCCGGG GGTCAAGGAA CAGGTCGGCG TCTATCTCGA CGAAAGCGTG
ATTTCGCTCT CGCTCTTCAC CCCCGACATC GATCTTTACG ACCTCAACCG CGTCGAAACG
CTGCGCGGGC CGCAGGGCAC GCTCTTCGGC TCGGGCTCGG TCGGCGGGAC GATCCGCTAC
ATCACCAACC AGCCGAAGAT CGGCGTGATG GAGGGCAGCG TCGAGGCGAA TCTCAACCTC
GTCGACGGTG ACGACATCGG CGGCCATCTG AAGGGCGCGG TCAATGTGCC GATGGGCGAC
AATGCGGCGC TGCGCGCGGT CGGCTATTAC ACACGCTACG GCGGCTTCAT CAACGCGATC
GGTCCGGCGG GCAAGGAGGA TGTCAACAGC GGCGAACGCT ACGGTGGACG CATCGCGCTC
ACCTTCGAGC CCAGCGACAG CCTCTCGATC ACCCCGCGCA TCGTCTATCA GAAGGTCACG
GCCGACGGCT TCAACCGGCA GGAAATCTAC AACCTCTACG CCAACCAGTT CACCACGACG
CGCCCCGCGG TGACCTTTGA CGAGCGCGAG CAATATCTGC TGCTGCGCGA GGCGTTCGAG
GATGAAACGC TGATCGCCGA CCTCAAGATC GACGTCGGGC TGGGCGGCGC GACGCTGACC
TCGGTAACGA GCTATATCAA CCGCGACATC CTCGTCAGCC GTGACGCGAG CGCGCTCACC
GGATCGGTAT CGGTCGACCT TGGGTTCCCC GACGCGGGCG TGCTGCTGCC GTCGAACCTG
CTCGACACCA CCGACCTCGA AACCTGGACA CAGGAGGTCC GCGTTGCGTC GGACAATGAC
GGGCCGTTCC AGTGGCTCGT CGGCGGCTTC TATTCCAAGA TCGACCGCGT CTATGCCCAG
CGGCTGCCGA CGCCGGGCTA TGATGCCGTC ACCGATGCGA CGCTTGGAGC CGGAACCTCG
GCGGGCGCGC GCAACGGCTT CGGCCCCGAT TCGCCATATA ACGCCGACCT GCCCTATGAC
ATCAAGCAGT TCGCGATCTT CGGTGAGATC AGCTATGATT TGAACGACGC CCTTACCGCG
ACGGCGGGCG GGCGCTATTA TGACTTCAAG GAAACGCGCA GCTTCGTCTC CGGCGGCCTC
TTTGCCAACG GAGACAACCG CACCGACAGC ACCAAGTCGA GCGGCTTCAC CCCGCGTTTC
CTGCTGTCCT ACGACGTCAG CGACAATGTC ACGGTGAATG CCCAGGCGTC GAAGGGCTTT
CGCCTCGGCG GGGTCAACGA TCCCTTGAAC CTGCCCCTCT GCTCGCCGCA GGACGCAGCC
TTGTTCGGCG CGTTTCAGGA TTATGACGAT GAAACATTGT GGAACTACGA ACTCGGCGTG
AAGACGCAGG GGCGCGGTTT CACCTTCAAC GCCGCGGGCT TTTACAACGA CATCAAGAAT
CTCCAGGTCA CGCTCGACGC CGGCACCTGT TCGTCGCGCA TCGTCTTCAA CGTGCCCAAG
GCGCATTCGA TGGGCGTGGA GTTCGAACTG GGGCTGTCGC CCGCCGACGG GCTCGACCTC
AACCTGTCGG GCAGCCTCAT CGAGGCCGAG TTCGACTCGA CGCTGCCGGG CGCACTCACG
GTCGCGACGG GTATCCGCGA CGGCAACCGC CTGCCGTCGG TGCCGAAGTT CCAGCTGACG
GCATCGGGCA GTTATGAATG GCCGATCGGT GACCGCGCGA ACATGTATGT CGCGGCATCC
TTCCAGCATG TCGGCACGCG CTACACCCAG CCGGCGGACC AGGAAAACAA CCCGCGCACC
TTCGTCCACA ACCTGCCCTT CGGCGGCGCC CCGGCCGGGG CATCGACGAC GGTCGACCTG
CAACTGCCCG ACTATCAACT CGTCAATCTG AGCGCGGGCG TCGATTTCGA CAACGGCCTG
TCGCTGATCG CCTATGTCAA CAATGTCTTC GACGAAAACG CCCTGCTCTC GTTCGACCGC
GAACGCGGCG GCCGCGCGCG GCTTGGCTAC ACTGTCGGCC AGCCGCGCAC CTTTGGCATC
ACCGCGCGCA AGACATTCTG A
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| Protein sequence | MNARASLLAG LSSLALVATP ATAQDAAAED DGNIIIVTAT KRDANLQDIP FSINAQTAED
IQKSGAVTLE DLSRNVAGLS VQNLGPGQSQ VSVRGVSAGQ VVRDQPGVKE QVGVYLDESV
ISLSLFTPDI DLYDLNRVET LRGPQGTLFG SGSVGGTIRY ITNQPKIGVM EGSVEANLNL
VDGDDIGGHL KGAVNVPMGD NAALRAVGYY TRYGGFINAI GPAGKEDVNS GERYGGRIAL
TFEPSDSLSI TPRIVYQKVT ADGFNRQEIY NLYANQFTTT RPAVTFDERE QYLLLREAFE
DETLIADLKI DVGLGGATLT SVTSYINRDI LVSRDASALT GSVSVDLGFP DAGVLLPSNL
LDTTDLETWT QEVRVASDND GPFQWLVGGF YSKIDRVYAQ RLPTPGYDAV TDATLGAGTS
AGARNGFGPD SPYNADLPYD IKQFAIFGEI SYDLNDALTA TAGGRYYDFK ETRSFVSGGL
FANGDNRTDS TKSSGFTPRF LLSYDVSDNV TVNAQASKGF RLGGVNDPLN LPLCSPQDAA
LFGAFQDYDD ETLWNYELGV KTQGRGFTFN AAGFYNDIKN LQVTLDAGTC SSRIVFNVPK
AHSMGVEFEL GLSPADGLDL NLSGSLIEAE FDSTLPGALT VATGIRDGNR LPSVPKFQLT
ASGSYEWPIG DRANMYVAAS FQHVGTRYTQ PADQENNPRT FVHNLPFGGA PAGASTTVDL
QLPDYQLVNL SAGVDFDNGL SLIAYVNNVF DENALLSFDR ERGGRARLGY TVGQPRTFGI
TARKTF
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