| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2295 |
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| Symbol | |
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| ID | 4080791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2419560 |
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| End bp | 2422079 |
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| Gene Length | 2520 bp |
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| Protein Length | 839 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638010674 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_617337 |
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| Protein GI | 103487776 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.698983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGAGTA TAGGAGCTAA TCGAGCGCCG CCCCCGCGTC CAGCGCCGCC AGCGCGTCCG
CGTCGCCCGG CGCCACGCCA AGGATATGCC GCGCCAGCGC CGGGCTGTGC CCCGCGCGCA
CGAAAGCGGC GACCTGCCGT TCGCGCAGCT TGGGGTCATC GAGCCCGCGT GCGGCAAAAG
GCCCCAAACG CCGCCGCCGG GCAAAGCCGA TCGCCGCCGC GACCGCCGCG CTCTCGGCCG
CCTCGATCGC TTCGCCGCTG TCCGCCTCGG CGATTCCATC GACGTAAAGC TGCGCCCTTA
CCCGCCGCAC TCCCAGCCCG CGCCGCGTCA TCGCGCCGGC GCGCATCGCG GCATATTGGC
GGTCGTCGAG ATAATGCAAA CGCTCCATCC GGTCGGCGAC CGCCTCGCAC GCCGCCATGG
CGTCACTTTC GTCCATCCAT TCGGATTCGC GCACTTTTCG GGCGAGATAG CGCAGCAGCT
TGGCGCGGCT CGTCGCGAAT CGCGCGACAT AGGCAAGCGC CAGTTCGTCG AGCTTCGCTG
CGCCGAGCGG TCTTTTCGAT CGGTCGAAGG GAGCAGGATG CTTGGGCATG TGCCATGTTT
GTGCCACAGT CGGGCCCGAT TGAGAACGAT CAACAGCGCC ATATCGGGCA CCAAAGCCCG
GATATGGGCG ATTTGTTCAA ACAACACAGG GTCCGCGCAC GCTTCATGGC ACAAAAGGAT
GACATGCTTG TTGCCGCGCG CCCCGAATCG AGGGACGTCG CACCCCTTAT GACCGAAAAT
CATGCCGCTT CGGCCGACAC GCTCGTGCCG ACGCCGACCC AATGCGCCCA GCCGCGCCGT
TTTTCCGACT TCGCCACCGT CGGCGAGGCG CTCGATTATG CCGCGAGCGG CACGCGCGGG
CTCAATTTCC ACGATCCGCG CGGGCGTCTG ATACGCGCCT ATCCCTATAG CGAGCTGCGC
GCCGACGCGC TCGCCGCCGC CTATCGCCTG ATCGCCGCGG GCGTGAAGCC GCAGGATCGC
ATCGCGCTGA TCGCCGAAAC CGGCCCCGAA TTCGCCGCGC TCTTCTTTGG CGCCATCTAT
GCCGGCGCCT GGCCGGTGCC GTTGCCGTTG CCGACCAGTT TCGGCGGGCG CGACTCCTAT
GTCGGCCAGC TCGTCGTCCA GCTCACGAGC TGCGACCCCA GAATGCTGTT TTTCCCGCCC
GAAATCGCCG CGATGGCGGT CGAGGCGGCC GAGCAGCGCG GGGTCGAGCC GCTCGACTGG
ACCGCCTTTG CCGAACGCGC GGCCCCCGTC GCCGACTTGC CCGCGCAAAA GACCGACGAG
ACCTGCTATC TTCAGTATAG CAGCGGCTCG ACGCGCTTCC CGCACGGCGT GGCGGTGACG
CACGGCGCGC TGCTCAACAA TCTGTCGGCG CATTCGCACG GCATGAAACT GCAGGACAGC
GACCGCTGCG TGTCGTGGCT GCCCTGGTAT CACGACATGG GGCTCGTCGG CTGCCTGCTC
TCCCCCGTCG CCAATCAGGT GTCGGTCGAC TATCTCAAAA CCGAGGATTT CGCGCGCCGC
CCGCTCGCCT GGCTCGACCT GATCAGCCGC AACCAGGGCA CGACGCTCAG CTATTCGCCG
ACCTTCGGCT ATGACATTTG CGCGCGCCGC ATCTCCAGCC AGAGCCATGT CGCCGACCGG
TTCGACCTGT CGCGATGGCG CGTCGCGGGC AATGGCGCCG ACATGATCCG TCCCGACGTG
ATGCAGGCCT TTGTCGACGC CTTTGCCGAT GCGGGGTTCA AGGCGAGCGC CTTCCTGCCG
AGCTATGGCC TGGCCGAAGC GACGCTCGCG GTCAGCATCA TGCCGCCGGG CGAGGGCATC
GTCGTCGAAC TGGTCGAGGA AACCGAACTG TCGGGCGCCG CGAACGACAG CGGCCGTCCG
ACCCGTTACC GCGCGATCGT CAACTGCGGC AAGGCGGTGA AGGACATGGT GATCGAGGTC
CGCGACGAGG CGGGCAATCC GCTCCCCGAC CAGACGGTCG GCAAGGTGTG GTGCACCGGC
CCGTCGCTGA TGACGGGCTA TTACCGCGAT CCCGAAGCGA CCGCGGCCTG CCTGAAGGAC
GGCTGGCTCG ACACGGGCGA TATGGGTTAT ATATCAAACG GTTATATCTA TATCGTCGGC
CGCGCCAAGG ATATGATCAT CATCAATGGC AAGAATCACT GGCCGCAGGA CATCGAATGG
GCGGTCGAAC AATTGCCGGG ATTCAAGTCG GGCGACATCG CCGCCTTTGC GATCACCACG
CCGGGCGGCG AAGAGACCCC CGCGGTGCTC GTCCAGTGCC GCACCAGCGA CGATGCCGAA
CGCGCCGCGC TGCGCGAGAC GATTCGCGAG CGCGTCCGCG CGATCACCGG CATGAACTGC
CTCGTCGAAC TGATCCCGCC GCGTACCCTG CCGCGCACCA GCTCGGGCAA ATTGAGCCGG
TCAAAGGCGC GCGCGCAATA TCTTGCCGGG GAAATCCAGC CCTTTGCCAT TGCGGCATAA
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| Protein sequence | MRSIGANRAP PPRPAPPARP RRPAPRQGYA APAPGCAPRA RKRRPAVRAA WGHRARVRQK
APNAAAGQSR SPPRPPRSRP PRSLRRCPPR RFHRRKAAPL PAALPARAAS SRRRASRHIG
GRRDNANAPS GRRPPRTPPW RHFRPSIRIR ALFGRDSAAA WRGSSRIARH RQAPVRRASL
RRAVFSIGRR EQDAWACAMF VPQSGPIEND QQRHIGHQSP DMGDLFKQHR VRARFMAQKD
DMLVAARPES RDVAPLMTEN HAASADTLVP TPTQCAQPRR FSDFATVGEA LDYAASGTRG
LNFHDPRGRL IRAYPYSELR ADALAAAYRL IAAGVKPQDR IALIAETGPE FAALFFGAIY
AGAWPVPLPL PTSFGGRDSY VGQLVVQLTS CDPRMLFFPP EIAAMAVEAA EQRGVEPLDW
TAFAERAAPV ADLPAQKTDE TCYLQYSSGS TRFPHGVAVT HGALLNNLSA HSHGMKLQDS
DRCVSWLPWY HDMGLVGCLL SPVANQVSVD YLKTEDFARR PLAWLDLISR NQGTTLSYSP
TFGYDICARR ISSQSHVADR FDLSRWRVAG NGADMIRPDV MQAFVDAFAD AGFKASAFLP
SYGLAEATLA VSIMPPGEGI VVELVEETEL SGAANDSGRP TRYRAIVNCG KAVKDMVIEV
RDEAGNPLPD QTVGKVWCTG PSLMTGYYRD PEATAACLKD GWLDTGDMGY ISNGYIYIVG
RAKDMIIING KNHWPQDIEW AVEQLPGFKS GDIAAFAITT PGGEETPAVL VQCRTSDDAE
RAALRETIRE RVRAITGMNC LVELIPPRTL PRTSSGKLSR SKARAQYLAG EIQPFAIAA
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