Gene Sala_2240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2240 
Symbol 
ID4080254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2353031 
End bp2353795 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content63% 
IMG OID638010618 
Productnucleotidyl transferase 
Protein accessionYP_617282 
Protein GI103487721 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1213] Predicted sugar nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTT CCAAAGCCAT CATCCTGTCG GCCGGACAGG GATCGCGTCT GTTGCCGTTG 
ACGCGCGACA TTCCCAAATG TCTGATCGAA CTGGGGGGCC GCAGCCTCAT CAGCTGGCAG
GTCGCGGCGC TCGTCGCGAA CGGGATCAGG GACATCGTCG TCGTCACGGG GTTCCGCACC
GAACGCGTCG AGGATCATGC GCTGCAACTC TATCGCGACA CGGGCGCGCG CATCCGCACG
CTGTTCAATC CCTTCTTTCA GGTCGCCGAC AATCTGGGCA CCTGCTGGAT CGCGCGCGAG
GAAATGGACC GCGATTTCAT CATTTTGAAC GGCGACACCA TCGTTTCGGA CGAGATCGTC
GCGCGACTGA TCGACGGGGT GAAGGAGCCG ATCACCGTCA CCGTCGATGT CAAAGCCGAT
TATGACGACG ACGATATGAA GGTGAACCGC GACGCCGAGG GGCGGCTCCA CCAGATCGGC
AAGCGGCTGC TGCCCCCCGA TACCAATGCC GAATCGATCG GGATGCTCGC CTTCACCGGC
GACGGCCCGT CGATCTTCCG CAACCAGGTC GACCAGATGA TGCGCACCCC CGACGGGGTC
GAGCGCTGGT ATCTGCGCGC GATCGACGTC ATCGCCAAGG GCAACCGCGT CGGCACCGTG
TCGATCGAGG GGCTCGAATG GCAGGAAGTC GACTTTCCGC AGGATGTCGA GGCCGCCGAG
GCGCTCACCG CCAAATGGGT GGCCGAAGGC CGCTACGCGA AATAG
 
Protein sequence
MTISKAIILS AGQGSRLLPL TRDIPKCLIE LGGRSLISWQ VAALVANGIR DIVVVTGFRT 
ERVEDHALQL YRDTGARIRT LFNPFFQVAD NLGTCWIARE EMDRDFIILN GDTIVSDEIV
ARLIDGVKEP ITVTVDVKAD YDDDDMKVNR DAEGRLHQIG KRLLPPDTNA ESIGMLAFTG
DGPSIFRNQV DQMMRTPDGV ERWYLRAIDV IAKGNRVGTV SIEGLEWQEV DFPQDVEAAE
ALTAKWVAEG RYAK