Gene Sala_2161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2161 
Symbol 
ID4080195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2272515 
End bp2272973 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content60% 
IMG OID638010539 
ProductMaoC-like dehydratase 
Protein accessionYP_617203 
Protein GI103487642 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0601335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.797114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCA TCACGCCGCA GGAGTTGCAG TCGAAGGTCG GGCAGCATCT CGGCACCTCC 
GATTGGGTGC TCGTCGATCA GGAGATGATC AACAAGTTCG CCGATGCGAC GGGCGATCAT
CAGTTCATCC ATATCGACGA GGAAAAGGCC AAGCAGACGC CGTTCGGCGG CACGATCGCG
CACGGCTTCC TCACCCTGTC GCTGATGCCG ATGCTCGGTC AGAGCACCGA CGGGCCGAAA
GTCGGCGGCG TCAAGATGGG CGTCAACTAT GGCTGCAACA AGGTTCGTTT CCTGTCGCCC
GTCCGTTCGG GCAAGCGCGT GCGCAGCCAT GTGAAGCTGC TCGAACTGGA AGAAAAGCGC
CCCGGCCAGT GGCAGCAGAC CAACGAAGTG ACGATAGAGA TCGAGGGCGA GGAAAAGCCC
GCCCTGATCG CCGAATGGAT CAGCCAGTTT TTCGTTTGA
 
Protein sequence
MATITPQELQ SKVGQHLGTS DWVLVDQEMI NKFADATGDH QFIHIDEEKA KQTPFGGTIA 
HGFLTLSLMP MLGQSTDGPK VGGVKMGVNY GCNKVRFLSP VRSGKRVRSH VKLLELEEKR
PGQWQQTNEV TIEIEGEEKP ALIAEWISQF FV