Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2161 |
Symbol | |
ID | 4080195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2272515 |
End bp | 2272973 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638010539 |
Product | MaoC-like dehydratase |
Protein accession | YP_617203 |
Protein GI | 103487642 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0601335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.797114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCA TCACGCCGCA GGAGTTGCAG TCGAAGGTCG GGCAGCATCT CGGCACCTCC GATTGGGTGC TCGTCGATCA GGAGATGATC AACAAGTTCG CCGATGCGAC GGGCGATCAT CAGTTCATCC ATATCGACGA GGAAAAGGCC AAGCAGACGC CGTTCGGCGG CACGATCGCG CACGGCTTCC TCACCCTGTC GCTGATGCCG ATGCTCGGTC AGAGCACCGA CGGGCCGAAA GTCGGCGGCG TCAAGATGGG CGTCAACTAT GGCTGCAACA AGGTTCGTTT CCTGTCGCCC GTCCGTTCGG GCAAGCGCGT GCGCAGCCAT GTGAAGCTGC TCGAACTGGA AGAAAAGCGC CCCGGCCAGT GGCAGCAGAC CAACGAAGTG ACGATAGAGA TCGAGGGCGA GGAAAAGCCC GCCCTGATCG CCGAATGGAT CAGCCAGTTT TTCGTTTGA
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Protein sequence | MATITPQELQ SKVGQHLGTS DWVLVDQEMI NKFADATGDH QFIHIDEEKA KQTPFGGTIA HGFLTLSLMP MLGQSTDGPK VGGVKMGVNY GCNKVRFLSP VRSGKRVRSH VKLLELEEKR PGQWQQTNEV TIEIEGEEKP ALIAEWISQF FV
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