Gene Sala_2136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2136 
Symbol 
ID4080133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2239561 
End bp2240499 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content71% 
IMG OID638010514 
Product3-beta hydroxysteroid dehydrogenase/isomerase 
Protein accessionYP_617178 
Protein GI103487617 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACTT TCGACGGGCA ATTGATCACG GTGCTGGGCG GCGGCGGCTT CCTCGGCCGC 
TATGTCGTGC AACGGTTGCT GGCGCGCGGC GCGCGCGTTC GTATTGCACA GCGCGACCCG
CGCGCGGCGA CCTTCCTGAA GCCGCTCGGC GGGCTTGGCC AGACGCAGTT CGTCCACGCC
GACGTCCGTG ACGCGGCGAG CGTGGCGCGC GCGGTGCAGG GCAGCGACGC GGTGATCAAC
CTGGTCGGCG CGTTCGACGA TATGCGCGCG GTGCAGGCCG ATGGCGCGGG ACATGTCGCG
ACGACGGCGA AAGCGGCGGG CGCGCGCGCG CTCGTCCATG TCTCGGCGAT CGGCGCCGAC
CGCGACAGCC CTTCGGCCTA TGGCCGCAGC AAGGGCGACG GCGAAGCCGC GGTGCGCGCG
GCCTTTACCG GGGCCGCCAT CCTGCGTCCC TCGATCATCT TTGGCCGCGA GGACCGGTTC
ATCAATCGCT TTGCCGGCAT GATGCGCCTC GCGCCGGTCA TGCCGGTGAT CGCGCCGCAA
GCGAAGTTCC AGCCCGTCTA TGTCGGCGAT GTCGCCGATG CGGTCGTCGC CGCGCTGGCC
GACACGGCCA CCGGCAGGCT GTTCGAACTC GGTGGGCCGC AGGTGCTGAC GATGCGCGAA
CTGCTCCGCT GGATCGCCGA TGCAACCGGA CGGTCGCCGC TGTTCATCGA CGTGCCCGAT
TTTCTTGCCT CGGCGCTCGC GACCGGATTC GGCTGGGCGC CCGGTGCGCC GATCACCAGA
GACCAGTGGC TGATGCTGCA AAGCGACAAT GTCGTGGCGA GCGGCGCCGC GGGCCTCGCC
GAGCTTGGCA TCACGCCCAC CCCGCTCGCG GCGGTCGCCG ACGGCTGGCT GGTGCAATAT
CGCCGCCACG GCCGGTTCAC GGTCGAAACC CCCGCCTGA
 
Protein sequence
MQTFDGQLIT VLGGGGFLGR YVVQRLLARG ARVRIAQRDP RAATFLKPLG GLGQTQFVHA 
DVRDAASVAR AVQGSDAVIN LVGAFDDMRA VQADGAGHVA TTAKAAGARA LVHVSAIGAD
RDSPSAYGRS KGDGEAAVRA AFTGAAILRP SIIFGREDRF INRFAGMMRL APVMPVIAPQ
AKFQPVYVGD VADAVVAALA DTATGRLFEL GGPQVLTMRE LLRWIADATG RSPLFIDVPD
FLASALATGF GWAPGAPITR DQWLMLQSDN VVASGAAGLA ELGITPTPLA AVADGWLVQY
RRHGRFTVET PA