| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2071 |
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| Symbol | |
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| ID | 4080007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2178915 |
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| End bp | 2179487 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638010445 |
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| Product | nitrogen-fixing NifU-like protein |
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| Protein accession | YP_617113 |
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| Protein GI | 103487552 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0694] Thioredoxin-like proteins and domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0389413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.471165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCATCG AAACCGAATC GACGCCCAAT CCCGCGACGC TCAAATTCCT GCCCGGTCGG
ACGGTGATGG AAACGGGAAC GCGCGACTTT GCCAGCGCCG AAGAAGCCGA AGCCTCGCCG
CTCGCCAGCG CGCTCTTTTC GCTGGGCGAC GTCACCGGGG TTTTCTTCGG CCGCGATTTC
GTGTCGGTGA CGATCGCCCC CGGCGCCGAA TGGGCCGATG TGAAGCCCGA TGTGCTTGGC
ATCGTCATGG ATCATTTTCT GGCCGGGGTG CCGTTGTTCA ACGCTGCCAG CGCCGGTTCT
GCGGTGCCAC CGGAAGATGC GGGCTTCGCC GATGATCCGG CCGATGCCGA CATCATCGAA
CAGATCAAGG AATTGATCGA AACGCGCGTG CGCCCCGCGG TCGCCAACGA CGGCGGCGAC
ATCGTCTATC GCGGCTTCGA CAAGGGCAAT GTGTATCTCA AGATGCAGGG CGCCTGCGCC
GGCTGTCCGT CGTCGACCGC AACGCTGAAA AATGGCATCG AGTCGCTCTT GAAACATTAT
GTGCCCGAGG TAACGGCAGT TCACGCCGTC TGA
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| Protein sequence | MLIETESTPN PATLKFLPGR TVMETGTRDF ASAEEAEASP LASALFSLGD VTGVFFGRDF
VSVTIAPGAE WADVKPDVLG IVMDHFLAGV PLFNAASAGS AVPPEDAGFA DDPADADIIE
QIKELIETRV RPAVANDGGD IVYRGFDKGN VYLKMQGACA GCPSSTATLK NGIESLLKHY
VPEVTAVHAV
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