Gene Sala_2069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2069 
Symbol 
ID4080005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2177677 
End bp2178303 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content74% 
IMG OID638010443 
Productpeptidase M22, glycoprotease 
Protein accessionYP_617111 
Protein GI103487550 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.513401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.488956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTGACG CGCCAACGCT CGTCATCGAT TCCGCCAGCG AGGCCTGCTC GGTCGCGCTG 
GTGGCAGGCG GGCGCGTCGT CGACTTTCGC CATGAGGTGA TCGGGCGCGG CCACGCCGAG
CGCCTCGTTC CGCTGATCGC CGAACTCGCG GACGGCGGGC GCGCCGATGC CATCGCGATC
GGCTGCGGCC CCGGCAGTTT CGCCGGCGTG CGGATCGGCG TCGCCGCGGC GCGCGCGCTC
GCGCTTGGCT GGCAGGTACC CGCGCATGGC TTTTCGACCC TCGCCCTCGT CGCGGCCGGT
GCGGCCGATC CGATCGGCGA GGCGGGCGGC GCGCTCGTCG TGATGGAGGG CGGTCACGGC
CAATGGTTCG TCCAGCCCTT TGCCGCCGAC CTGTCGCCGC GCGCCGATGC GTGTTCGCTG
CTTCCCGACG CGGCGGTCGC GCTGAACGAT GTGCTCATCG TCGGCAATCG CGCCGAGGCC
TTCGTTGCGC GCCGCGGGTC GGGGCGCGCG CTGGCCATGC TGCCCGACGC GCGCGCATTT
CTGCGCCTGC CGCGCGGCGC GCTGACCAAC CCGCCGAGCC CCATTTATGG TCGCGCGCCC
GACGCCCGAC CGATGAGCGG CGCATGA
 
Protein sequence
MSDAPTLVID SASEACSVAL VAGGRVVDFR HEVIGRGHAE RLVPLIAELA DGGRADAIAI 
GCGPGSFAGV RIGVAAARAL ALGWQVPAHG FSTLALVAAG AADPIGEAGG ALVVMEGGHG
QWFVQPFAAD LSPRADACSL LPDAAVALND VLIVGNRAEA FVARRGSGRA LAMLPDARAF
LRLPRGALTN PPSPIYGRAP DARPMSGA