Gene Sala_2066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2066 
Symbol 
ID4080002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2176080 
End bp2176505 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content61% 
IMG OID638010440 
Productferric uptake regulator family protein 
Protein accessionYP_617108 
Protein GI103487547 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.779744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.332641 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGCA ATATCGACCT TGAAGCGCTG TGCCACGAAA AGGGGCTGCG CATCACCGAA 
CAGCGCCGCA TCATCGCGCG TGTCATCTCG GAATCGGAGG ATCACCCCGA TGTCGAGACG
CTCTATGATC GCGCGTCGAA GATCGACAGC GGCATTTCGA TCGCCACCGT TTACCGCACG
GTGCGCCTGT TCGAGGAAGC GGGCATCCTC GACCGCCACG ATTTTGGCGA TGGCCGCTCG
CGCTACGAAG CCGCGCCGGA GGCACATCAC GACCATCTGA TCGATGTCGA GACGGGCAAG
GTGATCGAGT TTGTCGATCC CGAACTCGAA GCGTTGCAGA AGGTGATCGC CGAACGGCTG
GGCTTCCGCC TCGTCGATCA CCGCATGGAG CTTTACGGTG TCGCCATCGA TCGCAAGCGC
GACTGA
 
Protein sequence
MSGNIDLEAL CHEKGLRITE QRRIIARVIS ESEDHPDVET LYDRASKIDS GISIATVYRT 
VRLFEEAGIL DRHDFGDGRS RYEAAPEAHH DHLIDVETGK VIEFVDPELE ALQKVIAERL
GFRLVDHRME LYGVAIDRKR D