| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2064 |
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| Symbol | |
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| ID | 4080131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2173981 |
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| End bp | 2175315 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638010438 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_617106 |
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| Protein GI | 103487545 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.628869 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCG ACTCCCCCAA AACCTTTCAC GTCAAATCCT TCGGCTGCCA GATGAACGTC
TATGACGGCG AGCGCATGGC CGAGATGCTG GGCGCTGAGG GCTATGTGCC CGCCGCTGAC
GGCGCCGACG CCGATCTGGT CGTGCTGAAC ACCTGTCACA TTCGCGAGAA AGCCGCCGAG
AAAGTCTATT CGGACATCGG ACGACTGAAG CGTGACGATG GCAGCACGCC GACGATTGCC
GTCGCGGGCT GCGTCGCGCA GGCCGAGGGA GCGGAGATTG CGCGGCGTGC GCCGTCGGTC
GATGTCGTCG TCGGACCGCA GGCCTATCAC CGTCTGCCCG AACTGATCGC GCGTGCCGAG
CGGGGTGAGA AGGCGATCGA CCTCGACATG CCGGCGGAAA GCAAGTTCGG CGCGCTGCCA
AAGCGTAGCG GAAACCAGCG CCCGACCGCC TTCCTGACCG TGCAGGAAGG CTGCGACAAA
TTCTGCACCT ATTGCGTCGT GCCCTATACG CGCGGGGCGG AAATCAGCCG ACCCTTCGCC
GACCTGATCG CCGAGGCGCG CGCGCTCGTC GCGGGCGGGG TGCGCGAGAT CACGCTGCTG
GGGCAGAATG TCAACGCCTG GATCGGCGAG GATGCCAAGG GCCGGGCAAT CGGGCTCGAC
GGGCTGATCC GCGAACTGGC GAAAGAGGAC GGGCTCGAAC GCATCCGCTA CACCACCAGC
CACCCCAACG ACATGACCGA CGGGCTGATC GTCGCGCATG GCGAGGTCGA CAAGCTGATG
CCCTTCCTCC ACCTGCCGGT GCAGGCGGGC AGCGACCGCA TCCTCGCCGC GATGAACCGC
AGCCATAGTG TCGAATCCTA TCTGAAGGTC ATCGAGCGCG TCCGTGAAGC GCGCCCCGAC
ATCGCCATCT CGGGCGACTT CATCGTCGGT TTTCCCGGCG AGAGCGAGGC CGATTTCGCG
GCAACGCTCG ATATCGTTCG CGCCACTCGC TATGCGATGG CGTACAGCTT CAAATATTCG
CGCCGCCCCG GCACGCCGGC GGCGACGATG GACGATCAGA TCGACGAAGC GGTGATGAAC
GAGCGGCTCC AGCGGTTGCA GGCTTTGCTC AACGAGCAGC AGCAGGCGTT CAACGAAGCG
ACCGTCGGCC GCACGACCCG CCTGCTCCTC GAACGCAAGG GCAAGCGCGA AGGCCAGCTG
ATCGGCAAGT CGCCGTGGCT GCAATCGGTG CATGTCACCG CGCCGGGGCT GGCGATCGGC
GACATGATCG ACGTGCGCAT CACCTCGGCC GGCCCGAACA GCCTGGGCGC CGAGCCGCTG
ATGGCGATCG CCTAG
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| Protein sequence | MKSDSPKTFH VKSFGCQMNV YDGERMAEML GAEGYVPAAD GADADLVVLN TCHIREKAAE
KVYSDIGRLK RDDGSTPTIA VAGCVAQAEG AEIARRAPSV DVVVGPQAYH RLPELIARAE
RGEKAIDLDM PAESKFGALP KRSGNQRPTA FLTVQEGCDK FCTYCVVPYT RGAEISRPFA
DLIAEARALV AGGVREITLL GQNVNAWIGE DAKGRAIGLD GLIRELAKED GLERIRYTTS
HPNDMTDGLI VAHGEVDKLM PFLHLPVQAG SDRILAAMNR SHSVESYLKV IERVREARPD
IAISGDFIVG FPGESEADFA ATLDIVRATR YAMAYSFKYS RRPGTPAATM DDQIDEAVMN
ERLQRLQALL NEQQQAFNEA TVGRTTRLLL ERKGKREGQL IGKSPWLQSV HVTAPGLAIG
DMIDVRITSA GPNSLGAEPL MAIA
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