| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2063 |
|---|
| Symbol | |
|---|
| ID | 4080130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 2172838 |
|---|
| End bp | 2173845 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638010437 |
|---|
| Product | PhoH-like protein |
|---|
| Protein accession | YP_617105 |
|---|
| Protein GI | 103487544 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1702] Phosphate starvation-inducible protein PhoH, predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.590057 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCAAAC GCCCGCTGAC CGCCGCCACC CCCGCCGAAC CGGGCGATCG CGTTCGACTG
ACGGCCGAGT TTGAGAGGAC ACAGCTTCTG GGTATCCTGT TCGGTGAGTT CGACCGCAAT
CTCGTCGCGA TCGAAAACCG CCTCGGCGTC TATATCTCCG CGCGCGGCAA CCGCGTGCAG
ATCGAGGGCG AGGCCGAAGC CGCCGCCCGC GCGCGCGACG TGCTCACCGA CCTCTATGAC
CGCATCGAAA AGGGGCAGGA GGTCGACGCC GGCATGGTTG ACGGCGTGAT CGCGATGTCG
GCGCAGCCGA CGCTCGACGG CATCATCCGT CACGACAAGG ACGAAGCCCC GCCGGTGATG
ATCCGCACGC GCAAAAAGAC GATCGTCCCG CGCGCGCCGT CGCAAGTCCC CTATATGCAG
GCGCTCGCGC GCGACGATGT GATTTTCGCG CTCGGCCCCG CAGGCACCGG CAAGACCTAT
CTCGCCGTGG CGCAGGCGGT GGCGCAGCTC ATCACCGGCA GCGTCCAGCG CCTGATCCTG
TCGCGCCCCG CGGTCGAGGC GGGCGAAAAG CTGGGCTTCC TGCCCGGCGA CATGAAGGAA
AAGGTCGATC CCTATCTGCG CCCGCTCTAC GACGCGCTCC ACGACTGCCT GCCCGCCGAG
CAGGTCGAGC GCCGGATCGC GAGCGGGGAG ATCGAGATTG CGCCGCTCGC CTTCATGCGC
GGGCGCACGC TCGCCGATGC TTTCATCATC CTCGACGAGG CGCAGAATAC GACGATCCCG
CAGATGAAGA TGTTCCTCAC CCGCTTCGGC ATGAACAGCC GCATGGTGAT CTGCGGCGAC
CCCAAGCAGG TCGACCTGCC GGTGCCCGCG ACCTCGGGCC TTGCCGACGC GGTCGCACGG
CTCGAAGGGC TGGAAGGCAT CAACGTCAGC CGCTTCACCA GCGCCGACGT CGTCCGCCAC
CCGATCGTCG GGCGCATCGT CGAAGCCTAT GAGGGGCCGG GGAGCTAA
|
|---|
| Protein sequence | MSKRPLTAAT PAEPGDRVRL TAEFERTQLL GILFGEFDRN LVAIENRLGV YISARGNRVQ
IEGEAEAAAR ARDVLTDLYD RIEKGQEVDA GMVDGVIAMS AQPTLDGIIR HDKDEAPPVM
IRTRKKTIVP RAPSQVPYMQ ALARDDVIFA LGPAGTGKTY LAVAQAVAQL ITGSVQRLIL
SRPAVEAGEK LGFLPGDMKE KVDPYLRPLY DALHDCLPAE QVERRIASGE IEIAPLAFMR
GRTLADAFII LDEAQNTTIP QMKMFLTRFG MNSRMVICGD PKQVDLPVPA TSGLADAVAR
LEGLEGINVS RFTSADVVRH PIVGRIVEAY EGPGS
|
|---|
| |