Gene Sala_2062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2062 
Symbol 
ID4080129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2171966 
End bp2172343 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content60% 
IMG OID638010436 
ProductDoxX 
Protein accessionYP_617104 
Protein GI103487543 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.495511 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTC TCGATGGCTA TGGCGAACAG GCGTTTGCGT TGCTGCGGAT CGTGTCGGGG 
CTGTTGTTCC TCGCGCATGG TGTGCAGAAG TTCTTCAACT TTCCGGTCGC CTTTCCCTAT
CCGCTCAACC CGATGCTCCA TGCCGCGGGG ACGATCGAGA TCGTCGCCGG CGCGCTGATC
GCCATCGGGC TGTTCACCCG TCCCGCGGCC TTCATTGCAA GCGGCATGTC GGCGGTCGGC
TATTGGGTCG CGCATGGAAG TCAGGGACTC TATCCGATTG CCAATGGCGG CGAGACGATC
GCGCTTTACT GTTTCATCTT CCTGTTCATC GCGACGCGCG GCGCGGGGAT GTGGAGCGTC
GAGGGGATGA AGAAATAA
 
Protein sequence
MKFLDGYGEQ AFALLRIVSG LLFLAHGVQK FFNFPVAFPY PLNPMLHAAG TIEIVAGALI 
AIGLFTRPAA FIASGMSAVG YWVAHGSQGL YPIANGGETI ALYCFIFLFI ATRGAGMWSV
EGMKK