| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2023 |
|---|
| Symbol | hppA |
|---|
| ID | 4079960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 2134080 |
|---|
| End bp | 2136194 |
|---|
| Gene Length | 2115 bp |
|---|
| Protein Length | 704 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638010399 |
|---|
| Product | membrane-bound proton-translocating pyrophosphatase |
|---|
| Protein accession | YP_617067 |
|---|
| Protein GI | 103487506 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3808] Inorganic pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR01104] vacuolar-type H(+)-translocating pyrophosphatase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0149188 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0138521 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCGG TTTTGATCGC GATAGCGTGC GGCCTGTTGG CCGTACTCTA TGGATTCATT
ACCTCGCGGC AGGTGCTCAG CGCCTCCGCC GGTAATGAGA AGATGCAGGA AATCGCTGGC
GCCATCCAGG AAGGCGCCAA GGCGTATCTG GGCCGCCAGT ATCGCACCAT CGCCGTCGTC
GGCGTTGTTG TCGCCGTGCT TGTCGGGGTC TTCCTCGGCC CGATTTCGGC GACGGGTTTC
GTCATCGGCG CCGTGCTGTC GGGTGTGGCC GGCTATATCG GCATGAACAT TTCGGTCCGC
GCGAACGTGC GCACCGCGGC GGCAGCGCAG ACGGGGCTGC AGGCGGGCCT GACCATGGCG
TTTCGCGCCG GCGCGATCAC CGGAATGCTG GTGGCGGGTC TCGCGCTGCT CGCGATCTCG
GTCTTCTTCT GGTATCTCAC GGGCCCAGGC GGCTTTTCCG TCGGCGGCGA TGACCGCACC
GTGGTCGATG CGCTCGTCGC GCTGGCGTTC GGCGCGTCGC TCATCTCGAT CTTCGCGCGT
CTTGGCGGCG GCATCTTCAC CAAGGCCGCC GACGTCGGCG CCGACCTCGT CGGCAAGGTG
GAGGCCGGGA TCCCCGAGGA CGATCCGCGC AACCCCGCGG TGATCGCCGA CAATGTCGGC
GACAATGTCG GCGACTGCGC CGGCATGGCC GCGGACCTTT TCGAAACCTA TGTCGTCACC
GTCGGCGCCA CGATGGTGCT GATCGCACTG CTGCTGAAGG GCGCGGGCGA CATGCTGCTC
CCGCTGATGA CGCTGCCGCT GCTGATGGGC GGCGTGTGCA TCATCACCTC GATCATCGGC
ACCTATTTCG TGCGTCTCGG CAGCGGGACC AATGTGATGG GCGCGATGTA CAAGGGCTTC
CTCGTCACCG CGATCCTGTC GATCCCGGCG ATCTGGTTCG CGACCCAATA TGCGCTCGGC
GACATGAATG CGGAGATTGC GGGCACCGGC TTCAACGGCC GCGCGCTCTT CTATTGTTCG
CTGCTTGGCC TGGTCATCAC CGGGCTGATC ATCTGGATCA CCGAATATTA TACCGGCACC
AATTACCGCC CGGTGCGCAG CATCGCCAAG GCGTCGGAAA CGGGCCACGG CACCAATGTG
ATTCAGGGCC TTGCCGTCAG CCTGGAATCG ACCGCGCTGC CGACGCTCGT CATCTGCGTC
GGCATCATTG TCGCCTATCA GGTCGCGGGT ATCATCGGCA TCGCCTTTGG CGCCACCGCG
ATGCTCGCGC TCGCGGGCAT GGTCGTCGCG CTCGACGCCT ATGGTCCCGT CACCGACAAT
GCCGGCGGCA TTGCCGAGAT GGCGGGGCTC GATGACAGCG TGCGCGAGAA GACCGACCTG
CTCGATGCCG TGGGCAACAC GACCAAGGCG GTGACCAAAG GCTATGCCAT CGGTTCGGCG
GGTCTGGCGG CGCTGGTGCT GTTCGGCACC TACACCGCCG ACATTACCGA ATATTCGGCG
GAACTCGGCC TCGATGCGCC GCTGACCTTC TCGCTGTCGT CGCCCTATGT CATCGTCGGG
CTGCTGCTCG GTGCGCTCCT GCCCTATCTC TTCGGGGCGA TGGGCATGAC CGCGGTGGGC
CGCGCGGCGG GTGACGTGGT CAAGGATGTT CGCGACCAGT TCGCGAACAA CAAGGGCATC
ATGGATGGCA CCAGTCGCCC CGATTATGCC CGCACGGTCG ACCTGGTGAC CAAGGCGGCG
ATCAAGGAAA TGATCGTTCC GTCGCTGCTG CCGGTGCTTG CGCCGATCGT CGTCTATTTC
GTCATCCTGT GGGTCGCGGG TCCGGCCGCT GCGCTCGAAG CGCTCGGCGC GCTGCTGCTC
GGCGTGATCG TCGGGGGGCT GTTCGTTGCC ATATCGATGA CCTCGGGCGG TGGCGCGTGG
GACAATGCCA AGAAATATAT CGAGGACGGC AACCACGGCG GCAAGGGCAG CGAAGCCCAC
AAGGCGGCCG TCACCGGCGA TACCGTTGGC GATCCGTACA AGGATACCGC GGGCCCGGCA
GTGAACCCGA TGATCAAGAT CACCAATATC GTGGCGATCC TGCTCCTCGC GGCGCTGGCA
CACGGCGCGG CATAA
|
|---|
| Protein sequence | MNPVLIAIAC GLLAVLYGFI TSRQVLSASA GNEKMQEIAG AIQEGAKAYL GRQYRTIAVV
GVVVAVLVGV FLGPISATGF VIGAVLSGVA GYIGMNISVR ANVRTAAAAQ TGLQAGLTMA
FRAGAITGML VAGLALLAIS VFFWYLTGPG GFSVGGDDRT VVDALVALAF GASLISIFAR
LGGGIFTKAA DVGADLVGKV EAGIPEDDPR NPAVIADNVG DNVGDCAGMA ADLFETYVVT
VGATMVLIAL LLKGAGDMLL PLMTLPLLMG GVCIITSIIG TYFVRLGSGT NVMGAMYKGF
LVTAILSIPA IWFATQYALG DMNAEIAGTG FNGRALFYCS LLGLVITGLI IWITEYYTGT
NYRPVRSIAK ASETGHGTNV IQGLAVSLES TALPTLVICV GIIVAYQVAG IIGIAFGATA
MLALAGMVVA LDAYGPVTDN AGGIAEMAGL DDSVREKTDL LDAVGNTTKA VTKGYAIGSA
GLAALVLFGT YTADITEYSA ELGLDAPLTF SLSSPYVIVG LLLGALLPYL FGAMGMTAVG
RAAGDVVKDV RDQFANNKGI MDGTSRPDYA RTVDLVTKAA IKEMIVPSLL PVLAPIVVYF
VILWVAGPAA ALEALGALLL GVIVGGLFVA ISMTSGGGAW DNAKKYIEDG NHGGKGSEAH
KAAVTGDTVG DPYKDTAGPA VNPMIKITNI VAILLLAALA HGAA
|
|---|
| |