| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1999 |
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| Symbol | |
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| ID | 4082164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2109026 |
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| End bp | 2110168 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638010375 |
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| Product | phage major capsid protein, HK97 |
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| Protein accession | YP_617043 |
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| Protein GI | 103487482 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4653] Predicted phage phi-C31 gp36 major capsid-like protein |
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| TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00431544 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAGTGG ATATGGAAGT GAAGGCCGAT GCGCTGGACG GCGCGTTCGA TGCGGTGCTG
GCGGCGGAGG CCGTCGATGA GCTGAAGGCG TCGGTTGCGG CGCTGAAGGC ACAGGTCGAT
GCCCAGGCGG TCGCGGCGGC GCGGTTGCCG CTCGACGGGG CGAAGGCGGC CGATCCGGCG
CTGGACGCCT TTGTCGAACG TTATCTGCGG CGCGGGATCG ACGCCGGGGT GGAGATGAAG
AGCCTGTCGG GGGCGAGCGG AGCCGAGGGC GGCTATGCGG TGCCGCGCGA GATCGACACC
AGCATCGCCG CGACGCTGAA ATCGCTGTCG CCGATCCGCA GCATCGCGAC CGTGGTGCAG
ACAGGGACGA GCGGGTACCG GAAGCTGATC GCGACGGGCG CGACGGGCGC GGGCTGGGTC
GGCGAAAGCG ACGCGCGGCC CGAGACGGCG ACGCGCAGCT TTGCCGAGAT CGCGCCGCCG
TCGGGCGAGC TTTACGCCAA TCCGGCGGCG AGCCAGGCGA TGCTCGACGA TGCGATGTTC
AACGTCGAGG CCTGGCTGGC CGACGAGATC GGGCGCGAGT TCGCGGTCGC CGAAGGGGCG
GCGTTCGTGA CCGGCAACGG CACGAACCGG CCCAGGGGAT TCCTGACCTA TGCGACGAGC
GACGAGGGTG ACGGTGCGCG GCCGTTCGGC ACGTTGCAGC ATCTGGCGAC GGGCAGCGCG
GGCGCCTTTC CGGCGGTGAA CCCTGAGGAC AGACTGGTCG AGCTGGTCCA TGCGCTGAAA
GCTCCGTACC GGCAGGGCGC GGTGTGGGTG ATGAACAGCG ATACGCTGGC GCGCATCCGC
AAGTTCAAGA CGTCGGACGG CGCCTTCGTC TGGCAGCCGG GGCTGGTCGA GGGACAGGCG
GCGAGCCTGC TCGGCTATCC GGTCGTCGAG GCCGAGGACA TGCCCGATAT TGCGGCCGAC
AGCCTGTCGA TCGCCTTCGG CAATTTCCGC GCGGGCTATC TGATCGCCGA CCGCGGCGAG
ACGCGCATCC TGCGCGATCC GTTCAGCAAC AAGCCCTTCG TGCATTTCTA TGCAACCAAA
AGGGTCGGCG GCGCGATCAT CGATTCGCAG GCGATCAAGC TGATGAAATT CGCCGCCAGC
TGA
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| Protein sequence | MEVDMEVKAD ALDGAFDAVL AAEAVDELKA SVAALKAQVD AQAVAAARLP LDGAKAADPA
LDAFVERYLR RGIDAGVEMK SLSGASGAEG GYAVPREIDT SIAATLKSLS PIRSIATVVQ
TGTSGYRKLI ATGATGAGWV GESDARPETA TRSFAEIAPP SGELYANPAA SQAMLDDAMF
NVEAWLADEI GREFAVAEGA AFVTGNGTNR PRGFLTYATS DEGDGARPFG TLQHLATGSA
GAFPAVNPED RLVELVHALK APYRQGAVWV MNSDTLARIR KFKTSDGAFV WQPGLVEGQA
ASLLGYPVVE AEDMPDIAAD SLSIAFGNFR AGYLIADRGE TRILRDPFSN KPFVHFYATK
RVGGAIIDSQ AIKLMKFAAS
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