Gene Sala_1986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1986 
Symbol 
ID4081030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2095486 
End bp2096022 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content68% 
IMG OID638010362 
Producthypothetical protein 
Protein accessionYP_617030 
Protein GI103487469 
COG category[S] Function unknown 
COG ID[COG3812] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000813375 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0326161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTACG ACATGACCGT GCCCGCTTAC GTCAACGGAT TGAATGCCCT CTCCGCCCAG 
CTCGACAAGG CACGTGCCTG GGGCGCCGAC AATGGCGTTG GCGAACAGCA GCTGCTGGCG
GCCCGCCTCG CGCCCGACAT GTTCCCGCTC GCGGCACAGA TCCGCTTCGC CTGCATGCAG
GCGGTCCAGC CCGCGACGCG CCTCGGCGCA GCGGGTGCGC CCGGCTTTGC TGAGGACGGC
GCCGATTTCG CCGCGCTCCA GGCGCAAATC GCCGACGCGC TCGCCTGGCT CGGAGGGATC
GACCGGTCGA GCGTCGAGGG CGAGGCGGAC CGGCCGGTCA GCTTCGACCT GCCCAACGGA
ATGGTCTTCG ACATGACCGC CCTCACCTAT GTTCGCGACT GGGCGCAGCC GCAGTTTTAT
TTCCATCTCG TTGCCGCCTA TGCCATCCTG CGGCATATGG GAGCGCCGCT CGGCAAGGCC
GATTACGTCG GCTATATGAT GGCCTATCTC CGCCCCGGAA CGGCGCCGAC GGGCTGA
 
Protein sequence
MLYDMTVPAY VNGLNALSAQ LDKARAWGAD NGVGEQQLLA ARLAPDMFPL AAQIRFACMQ 
AVQPATRLGA AGAPGFAEDG ADFAALQAQI ADALAWLGGI DRSSVEGEAD RPVSFDLPNG
MVFDMTALTY VRDWAQPQFY FHLVAAYAIL RHMGAPLGKA DYVGYMMAYL RPGTAPTG