Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1986 |
Symbol | |
ID | 4081030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2095486 |
End bp | 2096022 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638010362 |
Product | hypothetical protein |
Protein accession | YP_617030 |
Protein GI | 103487469 |
COG category | [S] Function unknown |
COG ID | [COG3812] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000813375 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0326161 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTACG ACATGACCGT GCCCGCTTAC GTCAACGGAT TGAATGCCCT CTCCGCCCAG CTCGACAAGG CACGTGCCTG GGGCGCCGAC AATGGCGTTG GCGAACAGCA GCTGCTGGCG GCCCGCCTCG CGCCCGACAT GTTCCCGCTC GCGGCACAGA TCCGCTTCGC CTGCATGCAG GCGGTCCAGC CCGCGACGCG CCTCGGCGCA GCGGGTGCGC CCGGCTTTGC TGAGGACGGC GCCGATTTCG CCGCGCTCCA GGCGCAAATC GCCGACGCGC TCGCCTGGCT CGGAGGGATC GACCGGTCGA GCGTCGAGGG CGAGGCGGAC CGGCCGGTCA GCTTCGACCT GCCCAACGGA ATGGTCTTCG ACATGACCGC CCTCACCTAT GTTCGCGACT GGGCGCAGCC GCAGTTTTAT TTCCATCTCG TTGCCGCCTA TGCCATCCTG CGGCATATGG GAGCGCCGCT CGGCAAGGCC GATTACGTCG GCTATATGAT GGCCTATCTC CGCCCCGGAA CGGCGCCGAC GGGCTGA
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Protein sequence | MLYDMTVPAY VNGLNALSAQ LDKARAWGAD NGVGEQQLLA ARLAPDMFPL AAQIRFACMQ AVQPATRLGA AGAPGFAEDG ADFAALQAQI ADALAWLGGI DRSSVEGEAD RPVSFDLPNG MVFDMTALTY VRDWAQPQFY FHLVAAYAIL RHMGAPLGKA DYVGYMMAYL RPGTAPTG
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