| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1912 |
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| Symbol | |
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| ID | 4082768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2010815 |
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| End bp | 2013724 |
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| Gene Length | 2910 bp |
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| Protein Length | 969 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638010288 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_616957 |
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| Protein GI | 103487396 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCA AGGCACTGAT CGGAACGTCG ATCCTTGCGA TGGCGGTGGC GACACCGGCC
TTTGCGCAGG ATGCGGAGGA GGAAGTCGCG CGCGATGCGT TCGGCGGCGA AATCGTCGTC
ACCGCACAGC GCCAGTCGGA ACGACTGCAG GATGTGCCGA TCGCGGTCAG CGCCTTTTCG
GCCGAGGCGC TGGAGGCGCA ACAGATCGAG AATCCTTCCG ATCTGCAACT GACGCTCCCG
AACGTCACCT TCACCAAGAC GAATTTCACC TCGTCGAGCT TTACCATCCG TGGCATCGGC
GACCTTTGCG TTGGCGTGAG TTGCGACAGC GCGACGGCGA TCCACCAGAA TGAATCGCCG
CTCATCGGCA CGCGCCTGTT CGAAACCGAG TTTTTCGACC TCGAACGCAT CGAGGTGCTG
CGCGGCCCAC AGGGCACGCT GTTCGGTCGC AACGCGACCT CGGGCGTCGT CAACGTCGTC
ACCGCCAAGC CCAACCTCGA CGCCTTTGGC GCGGCGGGCG AGTTCGAATA TGGCAATTAC
AACAGCATCA AGGCCAAGGG CATGGTCAAC CTGCCCATCG GCGACACGCT GGGTGTGCGC
ATCGCGGGCT TTTACCTCAA CCGCGACGGC TATACGAAAA ACCTGTTCGA CGACAGCCGC
ATCGACGACC GCGACATGTA TGCGATCCGC GGATCGATCC GCTGGCAGCC GACCCCCGAC
ACGACGCTCG ACCTCATGGG CTATTATTTC CGCGAGGACG ACAACCGCCT GCGCATCCAG
AAACAATATT GCCAGCGCGA TCCCACCGGC GTTCTGGGTT GTCTGAACAA CCGCCGCGAT
CCGGGCGTGA CCAACGCCAA TTCGACCTTT GTGGGGGTTC TGACAAGCGC CGAGTTCCTC
GCGATCCGCG GCATCCCGAC GGCGTTCGCG CTGGGTAGTC TCTACGGCCC CGACGCGCTT
TCGACCTTCG CCCCGATCGC CGATCCGCGC GTCGTCAACA CCGATTTTAC GCCGACCTAT
TTCTCCGACG AACTGCAATT GCAGGGGCGT CTTGAGCACA GCTTCGGGGC GATCAACGTC
TCGCTCGCCG GCGTCTATCA GGAAGCGCGG GTCGACAGCA GCCAGGATTA CAACCTGTCG
ATCCAGGATC GCAGCTTCTT CGCGCCGGCG CTCAACACGC TTGCGGCCGC GGGAGCGGGT
CTGGTTCCCG GTCTGCCTGC ATCCTTCTTC GCCCCGATCG CGCAGGCGCT GATCCCCAAC
GGACCGAATG GGGTGCTATG CACGTCGCTG GCCGAGGAAT CGGGACTGGG TTCCTATGGC
GGCCGATCGC TCTGCACCGC AACACCTCAG GATTTCGACC GCTCGAACCA GAAGAGCAAC
GCCTGGTCGG GCGAAATGAT CGTCAGCTCC GACTTTGATG GCCCGTTCAA CTTCCTGCTG
GGCGGCATTT ACGGCGAGTC GCACCTCACC GAAAACAGCT ATTATGTGAA CTCGTTCGGC
ATCGACTATC TGACCGGGAT TCTCGGCACC TTCACCGCGC TGGGATCGGG AGGCACGATT
CCGCCATCTT TCCTCGCAAC GCCCTTTTTC CGTAACAATA CCGACGATCT GAAGGTCAAA
TCCTACGGAT TCTTCGGCGA GGGCTATTAT GAGATCAACG ACGCGATCAA GCTGACCGTC
GGACTGCGCT ACAACAACGA CAAGAAACGG GTACAGGCAC GCTCGACGCT GGCCAGCTTC
CTCGTTCCTT TCGGCCAGAC CGGCAGCGCC TTCGATTCGC CGTTCGTCGG CGCGTTCGAC
GCCGATCCGG GGCTTGCCGG CAACCAGCTT TTCCAGGTCC GAAAGGTCGG TTTCGACGAG
GTCACCGGCC GCGCGGTGCT CGACTGGAAG ATCACGCCCG ACAATCTCGT TTATGCGAGC
TATTCGCGCG GTTACAAGTC GGGCGGTATC AACCCGCCGC TGCAACCGGC CTTTGCGGTC
GATGAGGCCT TCTCGCCCGA AATCGTCAAC GCATTCGAAA TCGGGTCGAA GAACCGCTTT
GGCGCGCTGC AGATCAACGT CACGGGCTTC TATTACCAGT ATAAGGATCT GCAACTCAGC
CGCATCGTCG CGCGCACGTC GGTCAACGAC AATGTCGATG CGAATATCTG GGGCCTTGAA
GCCGAAGCGG TGATCACGCC CACACCCGAC TTTGTCGTCA ATATCGGCGC GAGCTATCTC
AACACCGAAG TGTCGAGCGA CAAGTTCCTC GGCAACCCGC GCGATCCGTC GGGCGGCCGG
TCGGACGCGG TGATCATCAA GGATATCACC AACGGGTCGA ACTGCGCGGT CGTTCCGACG
ACGGCGGGCA ACGCCGCGGG CACGGCGGGT TATGTCAGCG CGATCAACGC CAGCCTTGGC
CTTCAGGGGC CCGCTGGCTT CGGCCCGAAC AGCGGCATCA ATTCGCCGGG CGCCTTTGGC
ATCTGTTCGG TTCTTCAGGC CAATGCGGCG ACCGTGGGCG CCCTGTTCGG CGGCATCGCG
ATCGAAAATG CCGGCGTGCC GGTCAACATC CGCGGCAACA AGCTGCCGCA GGCGCCGAAT
GTGAAGTTCA GCGCGGGCGT CCAGTACACG CACAACTTCG CCAACGACAT GTCGCTGACG
CCGCGCCTCG ACGTCACCTA TACCGGCGAC AGCTATGGCA ATATCTTCAA CGGCCGGATC
AACGAGATCA ATGGCTATGC GCAGGTCAAT GCGCAGATCC AGCTGAATGG TCCCGACAAG
AAATGGTTCG TGAAGGCGTT TGTTTCGAAC ATCTTCGACA GCCAGCCCGT CACCGGCCTG
TATGTCACCG ACCAGTCGTC GGGCCTGTTC ACCAATGTGT TCACGCTCGA CCCGCGCCGC
TACGGCATCT CTGCCGGGTT CAAGTTCTGA
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| Protein sequence | MKFKALIGTS ILAMAVATPA FAQDAEEEVA RDAFGGEIVV TAQRQSERLQ DVPIAVSAFS
AEALEAQQIE NPSDLQLTLP NVTFTKTNFT SSSFTIRGIG DLCVGVSCDS ATAIHQNESP
LIGTRLFETE FFDLERIEVL RGPQGTLFGR NATSGVVNVV TAKPNLDAFG AAGEFEYGNY
NSIKAKGMVN LPIGDTLGVR IAGFYLNRDG YTKNLFDDSR IDDRDMYAIR GSIRWQPTPD
TTLDLMGYYF REDDNRLRIQ KQYCQRDPTG VLGCLNNRRD PGVTNANSTF VGVLTSAEFL
AIRGIPTAFA LGSLYGPDAL STFAPIADPR VVNTDFTPTY FSDELQLQGR LEHSFGAINV
SLAGVYQEAR VDSSQDYNLS IQDRSFFAPA LNTLAAAGAG LVPGLPASFF APIAQALIPN
GPNGVLCTSL AEESGLGSYG GRSLCTATPQ DFDRSNQKSN AWSGEMIVSS DFDGPFNFLL
GGIYGESHLT ENSYYVNSFG IDYLTGILGT FTALGSGGTI PPSFLATPFF RNNTDDLKVK
SYGFFGEGYY EINDAIKLTV GLRYNNDKKR VQARSTLASF LVPFGQTGSA FDSPFVGAFD
ADPGLAGNQL FQVRKVGFDE VTGRAVLDWK ITPDNLVYAS YSRGYKSGGI NPPLQPAFAV
DEAFSPEIVN AFEIGSKNRF GALQINVTGF YYQYKDLQLS RIVARTSVND NVDANIWGLE
AEAVITPTPD FVVNIGASYL NTEVSSDKFL GNPRDPSGGR SDAVIIKDIT NGSNCAVVPT
TAGNAAGTAG YVSAINASLG LQGPAGFGPN SGINSPGAFG ICSVLQANAA TVGALFGGIA
IENAGVPVNI RGNKLPQAPN VKFSAGVQYT HNFANDMSLT PRLDVTYTGD SYGNIFNGRI
NEINGYAQVN AQIQLNGPDK KWFVKAFVSN IFDSQPVTGL YVTDQSSGLF TNVFTLDPRR
YGISAGFKF
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