| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1883 |
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| Symbol | |
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| ID | 4082628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1981307 |
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| End bp | 1982611 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638010259 |
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| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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| Protein accession | YP_616928 |
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| Protein GI | 103487367 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.690443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.200024 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTACCT CGCGCGCCTT TGCCGGTCGC CGCTATGCGG TGCTGGGACT GGCGCGCTCG
GGGCTGGCCA CCGTCGAGGC GCTTGTCGCC AGCGGCGCGG GCGTCACCGC GTGGGATGAC
CGCGAGGAGG CGCGCGACGC CGCGATGGCG CTGGGCGCCG ACATCGGCAA TCCGCTGGAC
ATCGACCTCA TCGGCTTTGC GGGCGTCGTC GTATCGCCGG GCGTGCCGCT CAACCGCCAC
CCGATCGCCG CGCACGCGCG CGATGCCCAT GTCCCCGTCA TCGGCGACAT CGAGCTGTTT
GCCGAAGCGC GCAGCGAGCT GCCGCCGCAC AAGGTCGTCG GCATCACCGG CACCAATGGC
AAATCCACCG TCACCGCGCT GATCGCGCAC ATGCTTGAAA GCGCGGGCGT ACCCGTGCTG
ATGGGCGGCA ATATCGGTCT GCCGATCCTG ACGCGCGAAC CCCTGCCTGA AGCTGGTGTC
TATGTGCTCG AACTGTCGAG CTTTCAGATT GACCTTGCGC ACAGTCTGGC GTGCGACGTC
GCGGTGCTCA CCAACATCAG CCCCGATCAT CTCGACCGCT ACGACGGGTT CGAGGGTTAT
GTCGCATCGA AGGCGCGGCT GTTCAGCCTG CAACACCGCG ATCAGGTCGC GATCATCGCG
ACCGACGACG ATCCTTCAAA AATGATCGCA AGCCGGGTGA ACCATCGCCT TCACCGCGTT
TCGGCGAAGG ACATCGACCC CGTGGATCAG GCGCGCTGGC CCGCGCTGCA AGGCCCCCAC
AATGCGCAGA ACGCCGTTTG CGCGATCGCC GCGTGTCGCG TGCTGGGGCT GGACGACGAA
GCAATCGAAC GCGGCCTCGC GACCTTCCGG TCGCTCCCGC ACCGCATGGA ATTGGTCGGC
GAAGCCCGCG GCGCCCGCTG GTATAATGAC AGCAAGGCGA CCAACGCGGC TTCCGCTGCA
CCGGCGCTGG CGGCGTTTCC GCCGGCGCCG GACCAGCGTT TGCACTGGAT TGCGGGGGGA
CAGGCGAAGG GCGACGGGCT GGCGGCGTGC CGGCCGTGGT TCGGCCATGT CAAACGCGCC
TATCTGATCG GCGAGGCGAT GGCGCCGTTC GCGGCGGAAA TCGGCGACGC CATCGCGATC
GAGCGATCGG GCGACCTGGC GAGTGCTGTG GCGCAGGCGG CGGCGGCGGT CCAGCCCGGC
GACATCGTGC TGCTGTCGCC CGCCTGCGCG TCGTTCGACC AGTTCAAGGA TTATGAGGCG
CGCGGCGAGG CGTTCCGCGC AGCGGTCGAG GCGCTGGGGG CATGA
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| Protein sequence | MITSRAFAGR RYAVLGLARS GLATVEALVA SGAGVTAWDD REEARDAAMA LGADIGNPLD
IDLIGFAGVV VSPGVPLNRH PIAAHARDAH VPVIGDIELF AEARSELPPH KVVGITGTNG
KSTVTALIAH MLESAGVPVL MGGNIGLPIL TREPLPEAGV YVLELSSFQI DLAHSLACDV
AVLTNISPDH LDRYDGFEGY VASKARLFSL QHRDQVAIIA TDDDPSKMIA SRVNHRLHRV
SAKDIDPVDQ ARWPALQGPH NAQNAVCAIA ACRVLGLDDE AIERGLATFR SLPHRMELVG
EARGARWYND SKATNAASAA PALAAFPPAP DQRLHWIAGG QAKGDGLAAC RPWFGHVKRA
YLIGEAMAPF AAEIGDAIAI ERSGDLASAV AQAAAAVQPG DIVLLSPACA SFDQFKDYEA
RGEAFRAAVE ALGA
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