| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1865 |
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| Symbol | |
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| ID | 4080180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1959625 |
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| End bp | 1961184 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638010241 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_616910 |
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| Protein GI | 103487349 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.975513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.637576 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGCG ACGTTTCGGA CCTGTTCACA TTCGATCAGT TTCTGACCCA TTGGGCCGCC
GAGCGTCCCG ACCGGGTGGC GCTTCGCGAA GAGGATCGCG TCTACAGCCA TGGCGACCTC
GACGATCTGA CCGCCCGCGT CGCCTCGGCG CTGCTCGGCG CGGGGCTGAA CAAGGGCGAC
CGCGTTGCGT GGATCGGCAA GAACAGCGAC CTTTATTTCA TCCTCTTCTA TGGCGCCGCG
CGCGCGGGGA TCGTGATGGC GCCGGTCGGC TGGCGGCTGT CGCCGGCCGA ATGGGCGTTC
ATCGTCAACG ATACGCGCGC GAAAATGGTG TTTGCCGGGC CGGGGTTCGA GGGACTGGCC
GATCAGCTTG CGGGCAGGCT GGAGCATGAC CCCGTCATCG TCGATGCTGC AAAAGCATGG
GCGATGATCG AAGGGGCGGC GCGCACCGCC TTTGACCCTT CGGGCGCCAA CGACGCGGTG
CTGCAACTCT ACACATCGGG CACCACCGGC AATCCCAAGG GCGCGGTCCT GTCCAACCGC
AACCTGTTCG CGCTGCGCAA ACATTCGAGC ACGCTCGACC TGCCCTATAC CAGATGGGAC
GATGACGAGG CGGTGCTGGT CGCGATGCCG TGCGCGCATA TCGGCGGCAC CGGGCTCGGC
ATCATGGCGC TTGCGGCGGG GCTTCCCGGC ATCGTCCTCG CCGAGTTCAA CCCCGAGGGG
GTGTTCGACG CGGTCGAACA GCATGGCGTC ACGCGCTTTT TCATGGTCCC CGCGGCGCTC
CAGATGCTGT TGATGCACCC GCGCTGCACC AGCGTCGATT ACAGCCGCCT CAAATATATT
CTCTATGGCG CCGCGCCGAT CCCGCTCGAA CTGCTGCGCC AGTGCATCCA GGTGTTCGGC
GCGCAGTTCA TCCAGGCCTA TGGCATGACC GAAACGACCG GCACCATTTC GATGCTGCCG
CCCGAGGACC ATGACCCGGC GGGCAACAAA AGGATGCGCT CGGCGGGCAA GGCGCTGCCC
GGCGTCGAGA TCCGCGTCGT CGATGCCGAC GGCAATCCGC TGCCAACGGG CGAGGTGGGC
GAGGTCGTGA CGCGCTCGTC GAACAATATG CTGGGATACT GGAACCTGCC CGACGCCACC
GCCAACACGA TGACCGACGA CGGCTGGATA CGCACCGGCG ACGCGGGCTA TCTCGACGAG
GACGGCTATC TGTTCATCCA CGACCGGATG AAGGACATGA TCATCACCGG CGGCGAGAAT
GTCTATCCGG CCGAGGTCGA AAGCGCGATC TTTGGCCATC CCGCGGTGCA GGAGGTGGCG
GTGATCGGCA TCCCCGACGC TAAATGGGGC GAGAGCGTGA AGGCGGTGGT TGTCGCCAAG
CCGGGCGCGC GCATCGAGGA AGCCGACATC ATCGCCTGGG CGCGCGAACG CATCGCTCCC
TTCAAATGCC CGCGCAGTAT CGACGTGATC GACGCGCTGC CCCGCAATGC CAGCGGCAAG
ATATTGCGCA AGGATCTGCG CGCGCCCTAT TGGGAAGGCT ATGAGCGGAT GGTGAATTGA
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| Protein sequence | MARDVSDLFT FDQFLTHWAA ERPDRVALRE EDRVYSHGDL DDLTARVASA LLGAGLNKGD
RVAWIGKNSD LYFILFYGAA RAGIVMAPVG WRLSPAEWAF IVNDTRAKMV FAGPGFEGLA
DQLAGRLEHD PVIVDAAKAW AMIEGAARTA FDPSGANDAV LQLYTSGTTG NPKGAVLSNR
NLFALRKHSS TLDLPYTRWD DDEAVLVAMP CAHIGGTGLG IMALAAGLPG IVLAEFNPEG
VFDAVEQHGV TRFFMVPAAL QMLLMHPRCT SVDYSRLKYI LYGAAPIPLE LLRQCIQVFG
AQFIQAYGMT ETTGTISMLP PEDHDPAGNK RMRSAGKALP GVEIRVVDAD GNPLPTGEVG
EVVTRSSNNM LGYWNLPDAT ANTMTDDGWI RTGDAGYLDE DGYLFIHDRM KDMIITGGEN
VYPAEVESAI FGHPAVQEVA VIGIPDAKWG ESVKAVVVAK PGARIEEADI IAWARERIAP
FKCPRSIDVI DALPRNASGK ILRKDLRAPY WEGYERMVN
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