Gene Sala_1850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1850 
Symbol 
ID4082028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1945938 
End bp1946420 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content64% 
IMG OID638010225 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_616895 
Protein GI103487334 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0408298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.531787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCG CCATCCGCCC CGCCACCCGT GCCGACCTGC CGCTGATCGC CGAGTTCATC 
CGCGACCTCG CCGAATATGA AAGACTGTCG CACGAAGTCC GCTTCGACGA AGCGAAGCTC
GGCGAAAACC TCTTCGGCCC GCGCCCCTAT GCCGAGGTCG TGATCGGCGA AATCGACGGG
ACGCCGCAGG GCTTTGCGCT TTTCTTCCAC AATTTCTCGA CCTTCGAGGG GCGCCCCGGC
ATCTACCTGG AGGATCTGTT CGTCCGTCCC GAAGCGCGCG GATCGGGACT CGGCAAGGCG
CTGCTCGCGC ATCTCGCCGA ACTGTGCATC GAACGCGATT GCGCACGCCT CGAATGGTGG
GTGCTCGACT GGAACGAACC CAGCATCGGC TTCTACAAGA GCCTCGGCGC CAGGATGATG
GACGAATGGA CCGTGATGCG CGTCGATGGC GACGCGCTGA CCCGGCTTTC GCGCACCACG
TGA
 
Protein sequence
MTLAIRPATR ADLPLIAEFI RDLAEYERLS HEVRFDEAKL GENLFGPRPY AEVVIGEIDG 
TPQGFALFFH NFSTFEGRPG IYLEDLFVRP EARGSGLGKA LLAHLAELCI ERDCARLEWW
VLDWNEPSIG FYKSLGARMM DEWTVMRVDG DALTRLSRTT