| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1842 |
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| Symbol | |
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| ID | 4082020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1935505 |
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| End bp | 1936755 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638010217 |
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| Product | threonine dehydratase |
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| Protein accession | YP_616887 |
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| Protein GI | 103487326 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01127] threonine dehydratase, medium form |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.53937 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC ACCTTACCCT GACCTCCGCG GCCGATTTTC CGGCGATCAC ATTGGACGAT
GTGCGCGCGG CGGCGGGGCG AATTAACGGC GCGGTGGTGC GCACGCCGAC GCTCCATTCG
CAGACGCTGT CCGAGCTGGT CGGCGCCGAG GTGTGGCTGA AGTTCGAGAA TCTGCAATTC
ACCGCGGCCT ACAAGGAACG CGGGGCATTG AACGCGCTGC TGCTGCTCAG CGAAGAAGCC
AGGGCGCGCG GCGTGATCGC GGCGTCGGCG GGCAATCATG CGCAGGGGCT GGCCTATCAC
GGCAAAAGGC TGGGCGTGCC CGTCACCATC GTGATGCCCA GCACGACGCC GCAGGTGAAG
GTGTCGCAGA CCGCGGGCCA CGGCGCGACG ATCGTGCTGC ACGGCGAAAA GTTCGACGAC
GCCTATGCCC ATGCGCGCGA GCTGGAAGAG GAACGCGGGC TTACCTTTGT CCACCCCTTC
GACCATCCGC ACGTCGCGGC GGGGCAGGGG ACGGTGGCGC TCGAAATGCT TGAGGATGTG
CCTGAACTCG ACACGCTGAT CGTGCCGATC GGCGGCGGCG GGCTGCTCGC GGGCATGGGC
ACCGCGGCGC GCGGGATCAA GAACGACATG CGCCTCGTCG GCGTGCAGGC CGAGCTTTAT
CCCTCGATGT ACGCCGAGCT GAACGGCGTC GACATGGCGT GCGAGGGCGA TACGCTGGCC
GAGGGCATCG CGGTCAAGGA ACCGGGGAGC TATACGCGCA AGCTCGTCGC CGAGCTCAAC
GACGACATCG TGCTCGTCGC CGAACGGCAT CTGGAGCGCG CGGTGAGCCT GTTGCTCCAG
ATCGAAAAAA CGGTCGTCGA GGGCGCGGGC GCCGCGGGCC TCGCGGCGAT GCTCGCGCAC
CCCGACGAGT TCGCCGGGCG CAAGGTCGGA CTGGTGCTCA CCGGCGGCAA TATCGACACG
CGCCTCCTCG CGAACGTGCT GCTGCGCGAC CTTGCGCGAT CGGGCCGCAT CGCGCGGCTG
CGCATCCGCT TGCAGGACCG CCCCGGCGCG CTGTTCAAGG TGATGAAGCT GTTCGACGAG
AAACAGGTCA ACATCATCGA AATCTATCAC CAGCGCATCT TCACGACGCT CCCCGCGAAA
GGGCTGATCA CCGACATCGA ATGCGAAGCG CGCGACCGCG AGCATCTCGA CAGCCTCGTC
ACCGCTCTGC GCGACGCGGG CTATATGGTG ACGACGGTCG AGCTGGCTTA G
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| Protein sequence | MTDHLTLTSA ADFPAITLDD VRAAAGRING AVVRTPTLHS QTLSELVGAE VWLKFENLQF
TAAYKERGAL NALLLLSEEA RARGVIAASA GNHAQGLAYH GKRLGVPVTI VMPSTTPQVK
VSQTAGHGAT IVLHGEKFDD AYAHARELEE ERGLTFVHPF DHPHVAAGQG TVALEMLEDV
PELDTLIVPI GGGGLLAGMG TAARGIKNDM RLVGVQAELY PSMYAELNGV DMACEGDTLA
EGIAVKEPGS YTRKLVAELN DDIVLVAERH LERAVSLLLQ IEKTVVEGAG AAGLAAMLAH
PDEFAGRKVG LVLTGGNIDT RLLANVLLRD LARSGRIARL RIRLQDRPGA LFKVMKLFDE
KQVNIIEIYH QRIFTTLPAK GLITDIECEA RDREHLDSLV TALRDAGYMV TTVELA
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