Gene Sala_1825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1825 
Symbol 
ID4082177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1921903 
End bp1922271 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content63% 
IMG OID638010200 
Producttranscriptional coactivator/pterin dehydratase 
Protein accessionYP_616870 
Protein GI103487309 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2154] Pterin-4a-carbinolamine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.309531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.177058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCGC GCTCTAGACT TGTCGCTCAT CGCGCCCTTT CTTATGGCGA CCGCACGGCA 
TTGACCAGCG GGAGAAAAAC CATGGTGCAG AAACTCGACG ATGCGCAGCG CAGCGCGCTG
CTCGCCCGCT TCCCCCAATG GACGCACGAC CCGGTGCGCG ATGCGATCAC GCGGCAGTTC
CGGTTCGACG ATTTCGCGCA GGCCTTCGGC TTCATGGCGA GCGTCGCGAT CGTCGCCGAA
AAGCTGGACC ATCATCCCGA ATGGTCGAAC GTCTATAACC GCGTCGACGT GCTGCTGACG
ACGCACGATG CCAACGGACT TTCGGAGCGC GACGCGAAGC TCGCGGAGGC GATCGAGGCG
CTGCTCTGA
 
Protein sequence
MSSRSRLVAH RALSYGDRTA LTSGRKTMVQ KLDDAQRSAL LARFPQWTHD PVRDAITRQF 
RFDDFAQAFG FMASVAIVAE KLDHHPEWSN VYNRVDVLLT THDANGLSER DAKLAEAIEA
LL