Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1825 |
Symbol | |
ID | 4082177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1921903 |
End bp | 1922271 |
Gene Length | 369 bp |
Protein Length | 122 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638010200 |
Product | transcriptional coactivator/pterin dehydratase |
Protein accession | YP_616870 |
Protein GI | 103487309 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2154] Pterin-4a-carbinolamine dehydratase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.309531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.177058 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCATCGC GCTCTAGACT TGTCGCTCAT CGCGCCCTTT CTTATGGCGA CCGCACGGCA TTGACCAGCG GGAGAAAAAC CATGGTGCAG AAACTCGACG ATGCGCAGCG CAGCGCGCTG CTCGCCCGCT TCCCCCAATG GACGCACGAC CCGGTGCGCG ATGCGATCAC GCGGCAGTTC CGGTTCGACG ATTTCGCGCA GGCCTTCGGC TTCATGGCGA GCGTCGCGAT CGTCGCCGAA AAGCTGGACC ATCATCCCGA ATGGTCGAAC GTCTATAACC GCGTCGACGT GCTGCTGACG ACGCACGATG CCAACGGACT TTCGGAGCGC GACGCGAAGC TCGCGGAGGC GATCGAGGCG CTGCTCTGA
|
Protein sequence | MSSRSRLVAH RALSYGDRTA LTSGRKTMVQ KLDDAQRSAL LARFPQWTHD PVRDAITRQF RFDDFAQAFG FMASVAIVAE KLDHHPEWSN VYNRVDVLLT THDANGLSER DAKLAEAIEA LL
|
| |