Gene Sala_1816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1816 
Symbol 
ID4082207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1914292 
End bp1914573 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content64% 
IMG OID638010191 
Producthypothetical protein 
Protein accessionYP_616861 
Protein GI103487300 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0040301 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.186382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTCACAT TAGAGCGCGA TGACCTGATA TTGACCCACC GTGATTGCCC CCTGAAGTTC 
GTCGGCAAGA AGCGTCTCGC AGGACGGGCT GGTTGCCCGG ACCAGAGACG CGCCGCTGTC
CGGCGGGCTT CAGGGGGCAA CCCCTCCAGG GCGGGTCGAT TTTGGCCGAT TGCCACGTTG
CTCGTCGGGC GCGATGTCCC GCATCGCGCC GCTCCTCGCG CCTCGCACTC GGCCAAAATC
GCCTCCGTCA CGGTGGATCA ATATCATGTC ATCGCGCTCT AG
 
Protein sequence
MLTLERDDLI LTHRDCPLKF VGKKRLAGRA GCPDQRRAAV RRASGGNPSR AGRFWPIATL 
LVGRDVPHRA APRASHSAKI ASVTVDQYHV IAL