Gene Sala_1799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1799 
Symbol 
ID4082190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1895819 
End bp1896394 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content67% 
IMG OID638010174 
Productshikimate kinase 
Protein accessionYP_616844 
Protein GI103487283 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.279615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.998322 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGAA ACCCGAAAAG CCCGGCCCCT GCGTCACCCG ACGCCATCCC CGCGTCGATC 
CGCGACCGGT CGATCGTGCT CGTCGGGCTG ATGGGATCGG GCAAGTCGAC CGTCGGCCGC
CGTCTTGCGC AGCGGCTGCG GATGCGCTTC GCCGATGCCG ACGACGAGAT CGAGCGCGCC
GCCGGCATGA CGATTGCGGA CATTTTCGCG CGCTTTGGCG AAACGCATTT CCGCGACGGC
GAGCGCCGCG TCATCGCGCG CCTGCTCGGC GGCAAGCCGA TGGTGCTCGC AACCGGTGGC
GGCGCCTTCA TCAATGACGA GACGCGCGCG CTGATCCTGA AGGACAGCCT TTGCATCTGG
CTCGACGCCG ACATTCCCAC GCTCGTCGAG CGTGTCGGCC GCCGCAGCCA CCGCCCACTG
CTCAAGGATC GCGACCCCGG CGAAGTGCTG CGCGAACTGG CGGCGGTCCG TAATCCCATC
TATGCCGAGG CGCATCTGCG CGTCAGTTCG GCAAGCACGC CGCACGAACA TACGGTGCGG
GCGATTCTGG AGGCCCTGGC AACATGGAAA AGCTGA
 
Protein sequence
MSRNPKSPAP ASPDAIPASI RDRSIVLVGL MGSGKSTVGR RLAQRLRMRF ADADDEIERA 
AGMTIADIFA RFGETHFRDG ERRVIARLLG GKPMVLATGG GAFINDETRA LILKDSLCIW
LDADIPTLVE RVGRRSHRPL LKDRDPGEVL RELAAVRNPI YAEAHLRVSS ASTPHEHTVR
AILEALATWK S