| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1792 |
|---|
| Symbol | |
|---|
| ID | 4082260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 1889313 |
|---|
| End bp | 1889741 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638010167 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_616837 |
|---|
| Protein GI | 103487276 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
|---|
| TIGRFAM ID | [TIGR00586] mutator mutT protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCCGCGC TTGACCCCGT AAAACCGCCA AAAACCTCGC TTGTCGTCGC TGCGGCGGCG
CTCGTCGACC GCGACGGCAG GCTATTGGTG CAACAGCGGC CCGAGGGGCT TGCAATGGCG
GGGTTATGGG AGTTTCCGGG CGGCAAGCTC GAACCCGGCG AGACACCCGA GATGGCGCTC
ATCCGTGAAC TCGATGAGGA GCTGGGGATC GCCGTCGATC AGGCGTGCCT TGCGCCCGCC
TGTTTCGCGA GCGACATGCT CGGCGACCGG CACCTTCTCC TTCTTCTTTA TGTCTGTCGC
AAATGGCGCG GTACGCCGAT CGCGCGCCAT GCAAGCGCGC TAGACTGGGT GCGTCCGGTC
GAGCTTCACG CGCTTCCGAT GCCGCCCGCC GACAAGCCGT TGATCGGATT GCTGGAAGCG
TTGATCTAG
|
|---|
| Protein sequence | MAALDPVKPP KTSLVVAAAA LVDRDGRLLV QQRPEGLAMA GLWEFPGGKL EPGETPEMAL
IRELDEELGI AVDQACLAPA CFASDMLGDR HLLLLLYVCR KWRGTPIARH ASALDWVRPV
ELHALPMPPA DKPLIGLLEA LI
|
|---|
| |