| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1751 |
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| Symbol | aspS |
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| ID | 4081986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1843032 |
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| End bp | 1844891 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638010126 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_616797 |
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| Protein GI | 103487236 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.96886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.294173 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCGCC GACCTGCCTT AGGCGCGGCG ATAAATCACT TTAAACGTGA CATCCCCAAA
TCTTCGAAAG ACCATGAAAT GCACGCCTAT CGCACCCATC ATTGCGGCCA GCTTCGCGCC
GAGCATGTCG GCCAGACTGT TCGCCTGTCG GGCTGGGTGC ATCGCAAGCG CGATCATGGC
GGGCTGCTCT TCGTCGATCT GCGCGACCAT TATGGTCTGA CGCAGATCGT CGTGGACTCG
AGCGATGCCG CTTTCGCGAC GCTCGACGGC CTGCGCGCCG AAAGCGTCGT GACGATCACC
GGCGACGTCG TCGCGCGTTC GGCCGAGACG GTGAACGCGA ACCTGCCGAC CGGCGCGATC
GAGGTGCGCG CGCGCGAGGT GGCGGTGCAG TCGGCGGCGG CCGAGCTGCC GATGCCGGTC
GCGGGCGAAC AGGAGTATCC CGAGGACATC CGCCTCAAAT ATCGTTTCCT CGACCTGCGC
CGCGAGCGGC TGCACGCGAA CATCATGCTG CGCTCGAACG TTATCGCGTC GCTCCGCCGC
CGCATGGTCG AACAGGGCTT TACCGAATAT CAGACCCCGA TCCTCACCGC CTCGTCGCCC
GAAGGCGCGC GCGACTATCT GGTGCCCAGC CGCGTCCACC CCGGCAAATT CTATGCGCTG
CCGCAGGCAC CGCAGATGTT CAAGCAGCTT CTGATGGTCG CGGGCTTCGA CCGCTATTTC
CAGATCGCGC CCTGCTTCCG CGACGAGGAT GCGCGAGCCG ACCGTAGCCC GGGCGAATTT
TATCAGCTCG ATTTCGAAAT GAGCTTCGTC ACCCAGGACG ACGTCTTCAA CGCGATCGAA
CCCGTGCTCG CGGGCGTGTT CGAAGAGTTT GCGAACGGCA AGTCGGTGAC GCCCGCCGGC
TCCTTTCCGC GCATCCCGTA CCGCGAGTCG ATGCTGAAGT ACGGCAACGA CAAGCCCGAC
CTGCGCAACC CGCTGATCAT CAGCGACGTG TCGGCGCATT TCACCGGATC GGGCTTCGGC
CGCTTCGCCG ACATCGTCGC GGCGGGCGAT GTCGTGCGCG CGATTCCCGC GCCCGCGACG
GCCGACAAGA GCCGCAAGTT CTTCGACGAC ATGAACAGCT GGGCGCAGGG CGAAGGCTTT
GCCGGCCTCG GCTATGCGAC GCGCAAGGGC GGCGAATGGG GCGGCCCGAT CGCCAAGAAC
CACGGGGCGG AGAAAATGGA CGCGCTCGCC GCCGACCTCG GCCTCGGCCC CGACGATGGG
TTGTTCTTCG CCGCGGGCAG GGAAGCGCAG GCGGCGAAGC TCGCGGGCCT CGCGCGCACC
CGCGTCGCCG AGCAACTGGG CCTCATCGAC CCGAACAGGT TCGAAATGTG CTGGATCGTC
GATTTCCCGA TGTTCGAGCG CGACGAGGAA ACGGGCAAGA TCGACTTCAG CCACAATCCC
TTCTCGATGC CGCAGGGTGA GCTTGAGGCG CTCGAGACCA AAGACCCGCT CGACATTCTC
GCCTGGCAAT ATGACATCGT CTGCAACGGC GTCGAACTGT CGTCGGGCGC GATCCGCAAC
CATCGCCCCG ACATCATGTA CAAGGCGTTC GAAATTGCGG GCTATAGCCA GGCCGAGGTC
GACGCCAATT TCGCGGGCAT GATCAACGCG TTCAAATATG GCGCGCCGCC GCATGGCGGG
TCGGCGCCGG GGGTCGACCG CATCGTCATG CTGCTCGCCG ACGAGCCCAA TATCCGCGAA
GTCGTCGTCT TCCCGATGAA CCAGAAGGCC GAGGACCTGA TGATGGGTGC CCCGGCGCCG
GTATCAGAGA AGCAGCTCAG GGAACTCGGA ATCCGCATTG TCGACGGTCC GAAGAGCTAA
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| Protein sequence | MARRPALGAA INHFKRDIPK SSKDHEMHAY RTHHCGQLRA EHVGQTVRLS GWVHRKRDHG
GLLFVDLRDH YGLTQIVVDS SDAAFATLDG LRAESVVTIT GDVVARSAET VNANLPTGAI
EVRAREVAVQ SAAAELPMPV AGEQEYPEDI RLKYRFLDLR RERLHANIML RSNVIASLRR
RMVEQGFTEY QTPILTASSP EGARDYLVPS RVHPGKFYAL PQAPQMFKQL LMVAGFDRYF
QIAPCFRDED ARADRSPGEF YQLDFEMSFV TQDDVFNAIE PVLAGVFEEF ANGKSVTPAG
SFPRIPYRES MLKYGNDKPD LRNPLIISDV SAHFTGSGFG RFADIVAAGD VVRAIPAPAT
ADKSRKFFDD MNSWAQGEGF AGLGYATRKG GEWGGPIAKN HGAEKMDALA ADLGLGPDDG
LFFAAGREAQ AAKLAGLART RVAEQLGLID PNRFEMCWIV DFPMFERDEE TGKIDFSHNP
FSMPQGELEA LETKDPLDIL AWQYDIVCNG VELSSGAIRN HRPDIMYKAF EIAGYSQAEV
DANFAGMINA FKYGAPPHGG SAPGVDRIVM LLADEPNIRE VVVFPMNQKA EDLMMGAPAP
VSEKQLRELG IRIVDGPKS
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