Gene Sala_1730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1730 
SymbolsmpB 
ID4081192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1821322 
End bp1821807 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content61% 
IMG OID638010105 
ProductSsrA-binding protein 
Protein accessionYP_616776 
Protein GI103487215 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0691] tmRNA-binding protein 
TIGRFAM ID[TIGR00086] SsrA-binding protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.890336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.795485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCGTC CGCAGTCTGC CGCAGAGTTC GACAAGAAAA AGGTCGTCGC CGAGAACCGG 
CGCGCGCGCT TTGACTATGC CATCGAACAG GTGTTCGAGG CCGGAATCGC GTTGCAGGGG
ACCGAGGTCA AGTCGCTGCG CTTCGGCGAG GGGACGATCG CCGAAAGCTA TGCCGAAGTG
AACGGCGGCG AGGTGTGGCT GATCAACGCC AATATCCCTG AGTTCAGTCA TGGCAACCGC
TTCAACCACG AGCCGAAACG ACCGCGCAAA CTGCTGCTCA ACTGGCGCGA GATCAACAAG
CTGCACGCAG GCGTGGCCCG GCAGGGGATG ACGCTCGTTC CCTTGAGCGT CTATTTCAAC
AGCCGCGGCC GCGCGAAGGT CGAACTGGCG CTGGCGAAAG GCAAGAAGGC GCACGACAAG
CGCGAATCGA TCAAGGAGCG CGACTGGAAG CGCGACAAGC AAAGATTGCT GAAGGACCGC
GGATGA
 
Protein sequence
MVRPQSAAEF DKKKVVAENR RARFDYAIEQ VFEAGIALQG TEVKSLRFGE GTIAESYAEV 
NGGEVWLINA NIPEFSHGNR FNHEPKRPRK LLLNWREINK LHAGVARQGM TLVPLSVYFN
SRGRAKVELA LAKGKKAHDK RESIKERDWK RDKQRLLKDR G