Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1730 |
Symbol | smpB |
ID | 4081192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1821322 |
End bp | 1821807 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638010105 |
Product | SsrA-binding protein |
Protein accession | YP_616776 |
Protein GI | 103487215 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0691] tmRNA-binding protein |
TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.890336 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.795485 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCGTC CGCAGTCTGC CGCAGAGTTC GACAAGAAAA AGGTCGTCGC CGAGAACCGG CGCGCGCGCT TTGACTATGC CATCGAACAG GTGTTCGAGG CCGGAATCGC GTTGCAGGGG ACCGAGGTCA AGTCGCTGCG CTTCGGCGAG GGGACGATCG CCGAAAGCTA TGCCGAAGTG AACGGCGGCG AGGTGTGGCT GATCAACGCC AATATCCCTG AGTTCAGTCA TGGCAACCGC TTCAACCACG AGCCGAAACG ACCGCGCAAA CTGCTGCTCA ACTGGCGCGA GATCAACAAG CTGCACGCAG GCGTGGCCCG GCAGGGGATG ACGCTCGTTC CCTTGAGCGT CTATTTCAAC AGCCGCGGCC GCGCGAAGGT CGAACTGGCG CTGGCGAAAG GCAAGAAGGC GCACGACAAG CGCGAATCGA TCAAGGAGCG CGACTGGAAG CGCGACAAGC AAAGATTGCT GAAGGACCGC GGATGA
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Protein sequence | MVRPQSAAEF DKKKVVAENR RARFDYAIEQ VFEAGIALQG TEVKSLRFGE GTIAESYAEV NGGEVWLINA NIPEFSHGNR FNHEPKRPRK LLLNWREINK LHAGVARQGM TLVPLSVYFN SRGRAKVELA LAKGKKAHDK RESIKERDWK RDKQRLLKDR G
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