Gene Sala_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1716 
Symbol 
ID4081294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1806504 
End bp1807481 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content71% 
IMG OID638010091 
Productzinc-binding alcohol dehydrogenase 
Protein accessionYP_616762 
Protein GI103487201 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGCCT TGCAGGTGCG CGAACTATTG CCCGATCATG CGGGCACGGG GCTGGCCGAT 
CTCCCGGTTC CGCTCGCCGG GCCGGGGGAG GTACGCGTGC GGGTGCGCGC GGCGGGGGTG
AACTTTCCCG ACCTGTTGAT GACGCGCGGC GCTTATCAGC TCAAACCGGC GCTGCCGTTC
GTTCCGGGCC TGGAGTTTGC GGGCGAGGTC GATGCGGTGG GCGAGGGGGT GAAAAGCTGG
TCGGTGGGCG ATGCGGTCGT GGGCGGCAAC CGCTTCGGGG CGATGGCTGA ATATACGGTG
GTGCCCGCGG CGTCGCTGCG CCCCAGGCCC GCGGCGCTCG GCTGGGACGC GGCGGCCGCC
TATCCGGTTG CTTATCTCAC CGCCTATGTC GCGCTGGTCC GCGGGGCGCG GATCGAACCG
GGCGATTGGG TGCTGGTCCA CGGTGCGGCG GGCGGGGTGG GGCTCGCGAC CGTCGATCTG
GCGAAGGCGC TCGGCGCGCG GGTGATCGCG GCGGCGAGCC GCGCGGACAA GCGCGCGGCG
GTCGAGCGGC TTTACGCGCC CGATGCCGTG ATCGACGGCG CGCCGGGCTT TCGCGAGACG
GTGAAGGCGC TGACCGGCGG GCAGGGCGCC GATGTCATCG TTGATCCGGT CGGCGGCGAT
ATATTCGACG AATCGACGCG CTGCATCGCC TTTGGCGGGC GCTTGCTCGT CGTCGGCTTT
GCGTCGGGGC GCATCCCCGA ACTGCCCGCC AACATGCCGC TGATCAAGGG ATTTTCGGTC
GTCGGCGTGC GCGCGGGCGA ATATGGCCGC CGCTTTCCCG AGCGCGGCGC GGAGAATGTC
GCGGCGATCG ACGCGCTTGC GGCGGCGGGG ACGATCCGCC CGCATGTCCA TGCGACGCTC
GACCTGGCCG ACTGGCGCGA GGGGTTTGCG ATGCTGGAAC GACGCGAGGC GGTCGGCACG
GTCGTGCTGC GGCCGTGA
 
Protein sequence
MRALQVRELL PDHAGTGLAD LPVPLAGPGE VRVRVRAAGV NFPDLLMTRG AYQLKPALPF 
VPGLEFAGEV DAVGEGVKSW SVGDAVVGGN RFGAMAEYTV VPAASLRPRP AALGWDAAAA
YPVAYLTAYV ALVRGARIEP GDWVLVHGAA GGVGLATVDL AKALGARVIA AASRADKRAA
VERLYAPDAV IDGAPGFRET VKALTGGQGA DVIVDPVGGD IFDESTRCIA FGGRLLVVGF
ASGRIPELPA NMPLIKGFSV VGVRAGEYGR RFPERGAENV AAIDALAAAG TIRPHVHATL
DLADWREGFA MLERREAVGT VVLRP