Gene Sala_1712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1712 
Symbol 
ID4081289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1801740 
End bp1802906 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content73% 
IMG OID638010086 
Productglycosyl transferase, group 1 
Protein accessionYP_616758 
Protein GI103487197 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.170704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCCC TTCGCATCCT GTCGATCGCC ACCCTGTTTC CCGACGCCGC GCGGCCCAGT 
TTCGGCCTGT TCGTCGAAAA GAGCCTCCGC GCGCTCGCGG CACAGCCGGG TATCGAACTC
ACCGTCGCGG CGCCGCTCGG CCTGCCGCCC TTCCCGCTTT CGCTGCACCG GCGTTACCGC
GCGCTGCGCG ATCTGCCGCG CTCCGAAACG TGGAACGGCC TCGCGGTCCT GCGCCCGCGC
TTCCCGCTGA TTCCCAAGGT TGGCGCCCGC TTCAACCCCG CGGCCATCGC GCGCGCCGTG
CTGTCGGCCG TTCGGGACCG GGAGTTCGAC GTGATCGACG CGCAATTTTT CTACCCCGAC
GGCCCCGCCG CGATGCGCGT CGCGGGCGCG CGCGGCCTGC CCTTCTCGAT CAAGGCGCGC
GGCGCGGACA TCGGCCATTT CGGCCATGCC CCAGCAACGG CAGCGCAAGT GGCCGCCGCC
GCCGCCAAAG CCGCCGGGCT GCTCGCCGTG TCGGAGGCGA TGCGCCGCGA CATGGCGGCG
ATCGGCATCG ATCCGGCCAA GGTCGCGGTC CATTATACGG GCATCGACGC CACGCGCTTT
CATCCGGGCG ACCGCGCCGC GGCGCGCGCC GCGCTCGGCA TCGACGATGC GCCCGCGATC
CTCTCGGTCG GCGCACTCAT TCCGCGCAAG GGGCAGGCGC TGGTGATCGC CGCGCTGCCC
GCGCTCCCCG GCGTCCATTA TTGGCTCGCC GGCGCGGGCG AGGAGGAAGG CCGCTACCGC
GCGCTCGCCC GCCGGCATGG GGTCGAGCCG CGCGTGCATT TCATGGGTCC GGTCGCCAAC
GCCGACCTGC CGCAGCTTTA CCGCGCCGCC GACGTCGTCG TCATGCCCTC GGCCAGCGAG
GGTCTGGCCA ATGCGTGGGT CGAGGCGCTC GCCTGCGGCA CCCCGATCGT CATCAGCGAC
GCGGGCGGCG CCGCCGAGCT TGTCACCGCG CCCGCGGCGG GCCGCATCGT GACACGCACG
CCGGGCGCGA TCGCCGAAGC GGTGCAGGAG ATCCTCGCCG CCCCGCCCTC ACCGACCGAC
GTGGCCGCGA GCCTCGACGG CCGCTTCGAC TGGAACCGCA ACGGCCGCGA ATTGGCCGAG
CATCTGCGGC GCTGCGCAGG GTTTTAA
 
Protein sequence
MTPLRILSIA TLFPDAARPS FGLFVEKSLR ALAAQPGIEL TVAAPLGLPP FPLSLHRRYR 
ALRDLPRSET WNGLAVLRPR FPLIPKVGAR FNPAAIARAV LSAVRDREFD VIDAQFFYPD
GPAAMRVAGA RGLPFSIKAR GADIGHFGHA PATAAQVAAA AAKAAGLLAV SEAMRRDMAA
IGIDPAKVAV HYTGIDATRF HPGDRAAARA ALGIDDAPAI LSVGALIPRK GQALVIAALP
ALPGVHYWLA GAGEEEGRYR ALARRHGVEP RVHFMGPVAN ADLPQLYRAA DVVVMPSASE
GLANAWVEAL ACGTPIVISD AGGAAELVTA PAAGRIVTRT PGAIAEAVQE ILAAPPSPTD
VAASLDGRFD WNRNGRELAE HLRRCAGF