Gene Sala_1710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1710 
Symbol 
ID4081287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1800501 
End bp1801067 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content70% 
IMG OID638010084 
Producthypothetical protein 
Protein accessionYP_616756 
Protein GI103487195 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.385544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCTTTCG ATAACCAAAT CGGTTTTTTC TTTCCTACAC AATCATCCAA TGTCAAGTCC 
TCTGTCCGTA TCAAGGAGAC CGACATGATC CCACGCCGCC TCGAATCGCG TATCCACCCC
GACGACCGCC TCGATCCCGG CAAGACGGGG CCGCAGCTGA TGCGGCATGT GACCGTCAAT
GCCGCCGAAA GCCCGATTGC CTGGCTGGCG TCGCGCGGGC TGCTGACCCC GGCGCAATTG
CTGGCGGGCG AGCGGCTGCG CGCCGATTAT GAGCGCGCGG GGCTGGCGGC GCGGGTGACG
ATGCGCTGGG ACGCCGCGCC GCCGGGCAAG AGCCGCGGCG GCGCGCGCGC GGCCGATGCG
TCGCTGGCGC GGATCGACGC GCACCGGCGC TTTCACGGCG CGCTCGACGC GGCGGGGCCG
GGGCTCGCCG ACATTTGCTG GCGCGTGATC TGCGCGGGCG AGGGGATCGG CGGCGCCGAA
AAGGCGCTCG GCTGGCCCGC GCGATCGGGC AAGCTGGTGC TGGGGCTGGC GCTCGACCGC
CTCGTGCGTT TTTACGGGAC GGGGTAG
 
Protein sequence
MPFDNQIGFF FPTQSSNVKS SVRIKETDMI PRRLESRIHP DDRLDPGKTG PQLMRHVTVN 
AAESPIAWLA SRGLLTPAQL LAGERLRADY ERAGLAARVT MRWDAAPPGK SRGGARAADA
SLARIDAHRR FHGALDAAGP GLADICWRVI CAGEGIGGAE KALGWPARSG KLVLGLALDR
LVRFYGTG