| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1698 |
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| Symbol | |
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| ID | 4081101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1788271 |
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| End bp | 1789713 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638010072 |
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| Product | carotenoid oxygenase |
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| Protein accession | YP_616744 |
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| Protein GI | 103487183 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.459113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGCC AGGTCGAAAC ACTGATCCGC AGCGCCGTCG TCAAAACCAT CGGCAAGGTC
GCCGATTTCA ATCGCCGCCG CCTCCCCCGC CCCACCGACG CCCACCCCTT CCTCTCCGGC
ATCCACAGGC CGATGACCGA AGAATTGACG ATCGAGGCGC TGCGCGTCGA TGGCGAAATC
CCGGCCGCGC TACGCGGCCG TTACCTGCGC AACGGCCCGA ATCCGGCAAT GCCGCCCGAT
CCCGCCAGCT ATCACTGGTT CATCGGCGCC GGCATGGTCC ACGGCATCCG CATCGAAGGC
GGCCAGGCCG TCTGGTATCG CAACCGCTGG GTGCGTGGCA GCGAGGCGTG CGCTGCGCTT
GGCGAGGAGC TGCCGCCCGG CCCGCGCGAA GAGCGCAACG ACGCGCCGAA CACCAATGTC
GTGGGTCTCG CCGGGCGGAC GTTCGCAATC GTCGAGGCGG GCGGCACGCC GGTCGAGCTC
GATCATGAGC TCGGCACCAT CGCGCATAAC CCTTTCGACG GCACCCTCGC GGGTGCGTTC
ACCGCGCACC CACACGCCGA CCCCTTCACC GGGGAAACGC ACGCGATCAC CTATCGCAGC
GACGAACCGA ACAAGGTCTG GCACGTCGTG CTCGACGAAC AGGCGCATGT CGTGCGCGAA
GAACCGATTG CGGTCAGCGA CGGCCCCTCG ATCCACGACT GCGCGCTGAC CGAAAATTAC
GTGCTCGTCT TCGACCTGCC CGTTACTTTC TCGATGAAAC GGCTGCTCGC AGGTTATCGT
TTTCCCTATA TGTGGAACGA AAATCACCCG GCGCGCGTCG GCCTGCTCCC GCGCGAGGGC
CGTGGCGACG ACATCGTCTG GGTGCCGGTC GATCCCTGCT ATGTCTTTCA CCCCGCCAAC
GCCTTTGAAA CCGCGGACGG CCGGGTGATC GTCGATGTCG TCGCGCACGA AACGATGTTC
GCCACGTCGA AGCGCGGCCC CGACAGCGAA AAGTCGCGCA TGGAACGCTG GACGATCGAT
CCCGTCGCGC GCACGACGAC ACGCACCGTG ATCCACGACC ATGCGCAGGA GTTTCCGCGC
TATGACGAGC GGCTGACGAC GCGGCCCTAT CGCTATGTCT ACAGCATCGC GATCCCCGAC
GGCCGTTCAG CCGAATGGGC GCTCGCCGAT ACCCGGCTGT TCCGCCACGA TCTCGAAACG
GGCACGACCG CCATCCACGA CTTCGGCTCC GGCCGCCACC CCGGCGAGTT TGTATTCGTT
CCGCGCAAGG CGGCGGGCGC CGAGGATGAC GGCTGGCTGA TCGGCCTCGT CGTCGACATG
AACGACGAGA CCACCGACCT CGTCATCCTC AACGCCGACG ATTTCACCGG GCCGCCGCAA
GCCGTCGTCC ATCTGCCGCA CCGCGTTCCG CCGGGGTTTC ATGGCAATTG GGTCGCGGAC
TGA
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| Protein sequence | MASQVETLIR SAVVKTIGKV ADFNRRRLPR PTDAHPFLSG IHRPMTEELT IEALRVDGEI
PAALRGRYLR NGPNPAMPPD PASYHWFIGA GMVHGIRIEG GQAVWYRNRW VRGSEACAAL
GEELPPGPRE ERNDAPNTNV VGLAGRTFAI VEAGGTPVEL DHELGTIAHN PFDGTLAGAF
TAHPHADPFT GETHAITYRS DEPNKVWHVV LDEQAHVVRE EPIAVSDGPS IHDCALTENY
VLVFDLPVTF SMKRLLAGYR FPYMWNENHP ARVGLLPREG RGDDIVWVPV DPCYVFHPAN
AFETADGRVI VDVVAHETMF ATSKRGPDSE KSRMERWTID PVARTTTRTV IHDHAQEFPR
YDERLTTRPY RYVYSIAIPD GRSAEWALAD TRLFRHDLET GTTAIHDFGS GRHPGEFVFV
PRKAAGAEDD GWLIGLVVDM NDETTDLVIL NADDFTGPPQ AVVHLPHRVP PGFHGNWVAD
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