| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1676 |
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| Symbol | |
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| ID | 4081059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1763487 |
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| End bp | 1765145 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638010050 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_616722 |
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| Protein GI | 103487161 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.738116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGTG TGGTGATGAA GGCGGGCGGC TGGCTGGCGC TGGCGCTGTT CGCACTGGTC
ATGGCGGCGC TGGCGGTCGA TGCGCCGTTC GCCGTGCATA TGATGATCGT CGCGGCCGCC
TGTCTGGCGG GGCTCTGGGT TACGATTTCA CGGGCGGACT ATGGCGCCAT CGCGCGCGGC
CTGTTGAAGA TGCCCGTCGA TCAAGGCGTC TATGACGACG ATCCGGTGCG CTGGGGTGTC
ATCGCGACGC TGTTCTGGGG CATGGCGGGA ATGGCCGCGG GGCTGTTCAT CGCGCTCCAG
CTCGCCTTTC CCGCGCTTAA CCTCAATCTC GAATATACGA CCTTCGGGCG GCTGCGCCCG
CTCCACACCT CGGCGGTGAT CTTTGCGTTC GGCGGCAATG CGCTGATCGC GACGAGCTTT
TACGTCGTTC AGCGCACCTG CCGCGCGCGG CTCGCCTTTC CGAACCTCGC GCGCTTTGTC
TTCTGGGGCT ATCAGCTCTT CATCGTCCTC GCCGCCACCG GCTATCTGAT GGGGGTCACC
GCGGCGAAGG AATATGCCGA ACCCGAATGG TATGTCGACC TTTGGCTCAC CGTCGTCTGG
GTCGCTTACC TGGCCGTTTT CGTGGGCACG ATCGTCAAGC GCCGCGAACC GCACATCTAT
GTCGCGAACT GGTTCTACCT CAGCTTCATC GTCACCATCG CGATGCTGCA CATCGTCAAC
AATCTGTCGA TGCCCGCCAG CCTCTTCGGC TCGAAGAGCT ATGCCGCCTT CGCCGGAGTA
CAGGATGCGC TGACCCAGTG GTGGTACGGG CATAATGCGG TCGGTTTCTT CCTGACCGCG
GGCTTCCTCG CGATGATGTA TTATTTCGTG CCGAAGCAGG CCGAACGACC GGTCTATTCC
TACCGCCTGT CGATCATCCA CTTCTGGTCG CTCATCTTCC TCTATATCTG GGCGGGGCCG
CACCACCTGC ATTACACCGC GCTGCCCGAC TGGGCGCAGA CGCTCGGCAT GGTCTTTTCG
GTGATCCTGT GGATGCCGAG CTGGGGCGGG ATGATCAACG GGCTGATGAC GCTCAACGGC
GCGTGGGACA AGATCCGCAC CGACCCGATC ATCCGCATGA TGGTGATGGC GCTCGCCTTC
TACGGCATGA GCACCTTCGA AGGCCCGATG ATGTCGATCA AATGGGTCAA TTCGATGTCG
CACTACACCG ACTGGACGAT CGGCCATGTC CATTCGGGCG CGCTCGGCTG GAACGGCATG
ATCACCTTTG CCTGCGTCTA TTATCTGGTG CCGCGCCTGT GGGGTCGTCC GCGGCTTTAC
AGCCTGCGCA TGGTCAACTG GCACTTCTGG CTCGCGACCG TCGGCATCGT TTTCTACGCC
GCGTCGATGT GGGTCGCGGG GATCATGCAG GGGCTGATGT GGCGCGAATA TGGCGCCGAC
GGCTACCTCG TCTACAGCTT CGCCGAAAGC GTCGCGGCGA TGCACCCGAT GTATCTGATC
CGCGCGGCGG GCGGGGCGAT GTATCTCGCC GGCTTCGTCA TCATGATCGT CAACGTCTGG
GCGACGCTTG CCGGCCGGGT GCGCGCCGAA AAGCCGATGA CCGAAACGCC CTACAGCGCC
GCGGCGGACC GCCCGCTCGC GCCCGTGCCC GCCGAATAA
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| Protein sequence | MDGVVMKAGG WLALALFALV MAALAVDAPF AVHMMIVAAA CLAGLWVTIS RADYGAIARG
LLKMPVDQGV YDDDPVRWGV IATLFWGMAG MAAGLFIALQ LAFPALNLNL EYTTFGRLRP
LHTSAVIFAF GGNALIATSF YVVQRTCRAR LAFPNLARFV FWGYQLFIVL AATGYLMGVT
AAKEYAEPEW YVDLWLTVVW VAYLAVFVGT IVKRREPHIY VANWFYLSFI VTIAMLHIVN
NLSMPASLFG SKSYAAFAGV QDALTQWWYG HNAVGFFLTA GFLAMMYYFV PKQAERPVYS
YRLSIIHFWS LIFLYIWAGP HHLHYTALPD WAQTLGMVFS VILWMPSWGG MINGLMTLNG
AWDKIRTDPI IRMMVMALAF YGMSTFEGPM MSIKWVNSMS HYTDWTIGHV HSGALGWNGM
ITFACVYYLV PRLWGRPRLY SLRMVNWHFW LATVGIVFYA ASMWVAGIMQ GLMWREYGAD
GYLVYSFAES VAAMHPMYLI RAAGGAMYLA GFVIMIVNVW ATLAGRVRAE KPMTETPYSA
AADRPLAPVP AE
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