Gene Sala_1622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1622 
Symbol 
ID4081895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1702201 
End bp1702488 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content55% 
IMG OID638009994 
Productexcinuclease ABC subunit C 
Protein accessionYP_616668 
Protein GI103487107 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.477285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCCTG ACGCTCAGCC CGCAGTTTAC ATCATGACCA ACCGGAAGGG CGGCGTGCTA 
TACACCGGCG TCACGTCGAA TCTTATCGGT CGTGTATGGC AACACCGGGA AAGCGGACCG
GCTTTTCTGC GCGCTATCGA TGCGACAAGC TCGTTTGGTT CGAAGTACAT GGTGACATGC
ATTCAGCTAT CAGCCGCGAG AAGCAGATCA AGGCGGGATC GCGTGCCAAG AAAATCGCTC
TTATTGAAGC CGGCAATCCA GAGTGGCGGG ACCTGTTTCC TGAACTAA
 
Protein sequence
MHPDAQPAVY IMTNRKGGVL YTGVTSNLIG RVWQHRESGP AFLRAIDATS SFGSKYMVTC 
IQLSAARSRS RRDRVPRKSL LLKPAIQSGG TCFLN